RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 NR5A1Q13285 461 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 STK38Q15208 465 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 DBX2Q6ZNG2 339 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 EEPD1Q7L9B9 569 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF598Q86UK7 904 aaKnown RBP7.83□□□□□ -1.16
NIPBL-208ENST00000514335 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 KLHDC4Q8TBB5 520 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 PIP5K1AQ99755 562 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 GPATCH1Q9BRR8 931 aaKnown RBP7.83□□□□□ -1.16
NIPBL-208ENST00000514335 SEPT11Q9NVA2 429 aaKnown RBP7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF215Q9UL58 517 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-208ENST00000514335 NOX1Q9Y5S8 564 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 KIF28PB7ZC32 967 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 YKT6O15498 198 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ZBTB14O43829 449 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 DYNC1I2Q13409 638 aaKnown RBP7.83□□□□□ -1.16
NIPBL-208ENST00000514335 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 CIB1Q99828 191 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 SDHAF3Q9NRP4 125 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ADAMTS8Q9UP79 889 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 ATP11BQ9Y2G3 1177 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 PCDHGA2Q9Y5H1 932 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 USP16Q9Y5T5 823 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MAP3K7O43318 606 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 DGKIO75912 1065 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ATP5BP06576 529 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TOP1P11387 765 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 POLR2BP30876 1174 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 RPL9P32969 192 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PTGS2P35354 604 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 SOX11P35716 441 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PRKCEQ02156 737 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 NFE2L1Q14494 772 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 DSC3Q14574 896 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF792Q3KQV3 632 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CEP85LQ5SZL2 805 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 SNX30Q5VWJ9 437 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 SPOCD1Q6ZMY3 1216 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC81Q6ZN84 652 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TUBA1CQ9BQE3 449 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PIDD1Q9HB75 910 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 C8orf4Q9NR00 106 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CYTH3O43739 400 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TSPAN9O75954 239 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MT-ND3P03897 115 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 RHOXF2BP0C7M4 288 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CBX5P45973 191 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 BLVRAP53004 296 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 AP3M2P53677 418 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MTTPP55157 894 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 INSCQ1MX18 579 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 KLHL40Q2TBA0 621 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 P3H1Q32P28 736 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC183Q5T5S1 534 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 LIN54Q6MZP7 749 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PPP1R21Q6ZMI0 780 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 GALNT7Q86SF2 657 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CADM3Q8N126 398 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PPFIBP2Q8ND30 876 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 AFAP1L1Q8TED9 768 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 MAIP1Q8WWC4 291 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF653Q96CK0 615 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 FRMD6Q96NE9 622 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 RHOXF2Q9BQY4 288 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 VPS37BQ9H9H4 285 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 NCOA5Q9HCD5 579 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PFDN4Q9NQP4 134 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TMCO1Q9UM00 188 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TMEM5Q9Y2B1 443 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 H3BUI4 141 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CACNB4O00305 520 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 NVLO15381 856 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 HOXC11O43248 304 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ALDH2P05091 517 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 IFIT1P09914 478 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 CAPN3P20807 821 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ST13P50502 369 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 ZSCAN23Q3MJ62 389 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TMEM214Q6NUQ4 689 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 B4GALNT4Q76KP1 1039 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 SRGAP1Q7Z6B7 1085 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 FAM83AQ86UY5 434 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PDCD7Q8N8D1 485 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 UTP15Q8TED0 518 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 WDR24Q96S15 920 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 HERPUD2Q9BSE4 406 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 GBA3Q9H227 469 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 TMEM206Q9H813 350 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 WDR6Q9NNW5 1121 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PAG1Q9NWQ8 432 aa7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PTBP2Q9UKA9 531 aaKnown RBP7.82□□□□□ -1.16
NIPBL-208ENST00000514335 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms