RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TSPAN6	O43657	245 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PRC1	O43663	620 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KATNA1	O75449	491 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	F2	P00734	622 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KCNA6	P17658	529 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PTGS1	P23219	599 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ETV4	P43268	484 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TBX4	P57082	545 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ADAM17	P78536	824 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	OCRL	Q01968	901 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MTMR1	Q13613	665 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SART3	Q15020	963 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PPP2R5A	Q15172	486 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LCE5A	Q5TCM9	118 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PIK3R6	Q5UE93	754 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	BTBD2	Q9BX70	525 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CD244	Q9BZW8	370 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	INCENP	Q9NQS7	918 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KCNH7	Q9NS40	1196 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SAMD15	Q9P1V8	674 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ASB1	Q9Y576	335 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PCDHA9	Q9Y5H5	950 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SLC12A8	A0AV02	714 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NEMP1	O14524	444 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MAFG	O15525	162 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PYGM	P11217	842 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KRT15	P19012	456 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SDHA	P31040	664 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	GLRB	P48167	497 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	DNM2	P50570	870 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ITK	Q08881	620 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	WDR72	Q3MJ13	1102 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PTRH1	Q86Y79	214 aa	Known RBP	4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	STPG3	Q8N7X2	389 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CHMP4C	Q96CF2	233 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CABP5	Q9NP86	173 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SLC52A1	Q9NWF4	448 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	GALNT8	Q9NY28	637 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZDHHC9	Q9Y397	364 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TELO2	Q9Y4R8	837 aa		4.55	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ACOT7	O00154	380 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	GAS7	O60861	476 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LTF	P02788	710 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SRGAP2C	P0DJJ0	459 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CSF2RB	P32927	897 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LSS	P48449	732 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SELENOP	P49908	381 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SESN2	P58004	480 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RAC3	P60763	192 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	DSG1	Q02413	1049 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	STIL	Q15468	1287 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SYDE2	Q5VT97	1194 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ABHD17C	Q6PCB6	329 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LHFPL2	Q6ZUX7	228 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	OSTM1	Q86WC4	334 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NME9	Q86XW9	330 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PASD1	Q8IV76	773 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SMC1B	Q8NDV3	1235 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NUDT10	Q8NFP7	164 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SH3RF2	Q8TEC5	729 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LPP	Q93052	612 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MTMR8	Q96EF0	704 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NUDT11	Q96G61	164 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SYT3	Q9BQG1	590 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	BOC	Q9BWV1	1114 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KRTAP9-3	Q9BYQ3	159 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PPP4R1L	Q9P1A2	415 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	B4GALT6	Q9UBX8	382 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CBLC	Q9ULV8	474 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZKSCAN5	Q9Y2L8	839 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TSC22D4	Q9Y3Q8	395 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ADAMTS20	P59510	1910 aa		4.54	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PLEKHD1	A6NEE1	506 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	FAM90A27P	A6NNH2	459 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	FOXP2	O15409	715 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	B4GALT4	O60513	344 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ULK1	O75385	1050 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	GLRX3	O76003	335 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	C4BPA	P04003	597 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	AMY2A	P04746	511 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	AMY2B	P19961	511 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	FNTB	P49356	437 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MEOX1	P50221	254 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RAB27A	P51159	221 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TMPRSS15	P98073	1019 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TOP3A	Q13472	1001 aa	Predicted RBP	4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PIN1	Q13526	163 aa	Predicted RBP	4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	OTOP2	Q7RTS6	562 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	C11orf74	Q86VG3	221 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RAVER1	Q8IY67	606 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CCDC146	Q8IYE0	955 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CNTD1	Q8N815	330 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	C2orf69	Q8N8R5	385 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	IGSF22	Q8N9C0	903 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CHST14	Q8NCH0	376 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	DNER	Q8NFT8	737 aa		4.53	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LMF1	Q96S06	567 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms