RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 TCEAL9Q9UHQ7 104 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 SAMM50Q9Y512 469 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 PCDHGC5Q9Y5F6 944 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
SNHG4-208ENST00000514110 PLXNA4Q9HCM2 1894 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 MYH9P35579 1960 aaKnown RBP13.82□□□□□ -0.2
SNHG4-208ENST00000514110 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 REC8O95072 547 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 FAM189BP81408 668 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 DSC3Q14574 896 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 SMAD2Q15796 467 aaKnown RBP13.81□□□□□ -0.2
SNHG4-208ENST00000514110 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 ADHFE1Q8IWW8 467 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 GJA10Q969M2 543 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 DISC1Q9NRI5 854 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 CEP131Q9UPN4 1083 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 HCN4Q9Y3Q4 1203 aa13.81□□□□□ -0.2
SNHG4-208ENST00000514110 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 MAGEB2O15479 319 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 CHMP2AO43633 222 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 OATP04181 439 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 FGFR1P11362 822 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 USP11P51784 963 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 NLRP11P59045 1033 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 NLRP5P59047 1200 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 PRKCEQ02156 737 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 SMAD4Q13485 552 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 UGCGQ16739 394 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 SPOUT1Q5T280 376 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 EFCAB12Q6NXP0 572 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 RBM23Q86U06 439 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 SLC5A5Q92911 643 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 ADAMTS10Q9H324 1103 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 UNC45AQ9H3U1 944 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
SNHG4-208ENST00000514110 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
SNHG4-208ENST00000514110 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 DCXO43602 365 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 GAS7O60861 476 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 FGF18O76093 207 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 ALADP13716 330 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 NRIP1P48552 1158 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 NDUFV1P49821 464 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 SSRP1Q08945 709 aaKnown RBP13.79□□□□□ -0.2
SNHG4-208ENST00000514110 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 EFHBQ8N7U6 833 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 PPP2R3CQ969Q6 453 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 RIT2Q99578 217 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 CWH43Q9H720 699 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
SNHG4-208ENST00000514110 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 NRBP2Q9NSY0 501 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-208ENST00000514110 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-208ENST00000514110 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 PCDHB12Q9Y5F1 795 aa13.79□□□□□ -0.2
SNHG4-208ENST00000514110 PSMD10O75832 226 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 TDP2O95551 362 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 EYA4O95677 639 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 GLP2RO95838 553 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 TMOD1P28289 359 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 SFNP31947 248 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 ERVFC1P60507 584 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 Q4G0T1 1027 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 TEKT3Q9BXF9 490 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 BARX2Q9UMQ3 279 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-208ENST00000514110 ARIH1Q9Y4X5 557 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-208ENST00000514110 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
SNHG4-208ENST00000514110 CYP3A7-CYP3A51PA0A087WV96 503 aa13.77□□□□□ -0.21
SNHG4-208ENST00000514110 TMEM150BA6NC51 233 aa13.77□□□□□ -0.21
SNHG4-208ENST00000514110 M0R2N6 131 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms