RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 PPP1R13LQ8WUF5 828 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 ARNTL2Q8WYA1 636 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 SSH1Q8WYL5 1049 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 GAL3ST3Q96A11 431 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 SCLYQ96I15 445 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 SEC16BQ96JE7 1060 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 FGD4Q96M96 766 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 LRRC3Q9BY71 257 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 TRPV6Q9H1D0 765 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 UBP1Q9NZI7 540 aa5.84□□□□□ -1.47
HTT-211ENST00000513326 NOP53Q9NZM5 478 aaKnown RBP5.84□□□□□ -1.47
HTT-211ENST00000513326 PTPRSQ13332 1948 aa5.84□□□□□ -1.48
HTT-211ENST00000513326 ASTN1O14525 1302 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 LOC100289279A0A1B0GTE1 492 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ARVCFO00192 962 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 DDX3YO15523 660 aaKnown RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 STRNO43815 780 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ADAM11O75078 769 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 CILPO75339 1184 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ECEL1O95672 775 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 BPNT1O95861 308 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 FGBP02675 491 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ASGR1P07306 291 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 LDHCP07864 332 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 CYP2D6P10635 497 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 AKR1A1P14550 325 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ATP2A2P16615 1042 aaKnown RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 ATF4P18848 351 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 POU3F3P20264 500 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 USP14P54578 494 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 TAP1Q03518 808 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 COL9A2Q14055 689 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 MPP2Q14168 576 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 COG2Q14746 738 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 MVPQ14764 893 aaKnown RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 FOXD4L6Q3SYB3 417 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 TMEM63BQ5T3F8 832 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 NAA16Q6N069 864 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 FOXD4L3Q6VB84 417 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 WDR63Q8IWG1 891 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 ZSCAN1Q8NBB4 408 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 GDPD5Q8WTR4 605 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 NEUROD6Q96NK8 337 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 MMP19Q99542 508 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 MEIS3Q99687 375 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 HIPK3Q9H422 1215 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 CCDC86Q9H6F5 360 aaKnown RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 KCNK4Q9NYG8 393 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 LRP2BPQ9P2M1 347 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ZHX1Q9UKY1 873 aaPredicted RBP5.83□□□□□ -1.48
HTT-211ENST00000513326 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 CFAP54Q96N23 3096 aa5.83□□□□□ -1.48
HTT-211ENST00000513326 ELP1O95163 1332 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 A0A0U1RQG5 324 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 B4GALT4O60513 344 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 IGSF3O75054 1194 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 FLOT1O75955 427 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 MAP4K4O95819 1239 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 HLA-DOAP06340 250 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 UBTFL1P0CB47 393 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 FCER1AP12319 257 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 CST5P28325 142 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 PSMC6P62333 389 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 RPL6Q02878 288 aaKnown RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 PTPN11Q06124 597 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 DUOXA2Q1HG44 320 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 CERKLQ49MI3 558 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 PRRT3Q5FWE3 981 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 EXOSC6Q5RKV6 272 aaKnown RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 IGF2-ASQ6U949 168 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 CXCL17Q6UXB2 119 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 ABRAQ8N0Z2 381 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 PRSS33Q8NF86 280 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 REPS2Q8NFH8 660 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 TET1Q8NFU7 2136 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 GPBAR1Q8TDU6 330 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 NUP133Q8WUM0 1156 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 NKD1Q969G9 470 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 UPF3AQ9H1J1 476 aaKnown RBP5.82□□□□□ -1.48
HTT-211ENST00000513326 MROH8Q9H579 483 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 SERPINB13Q9UIV8 391 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 PCDHA4Q9UN74 947 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 COG5Q9UP83 839 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 RIPK3Q9Y572 518 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 SLC4A7Q9Y6M7 1214 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 SPTBN4Q9H254 2564 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 TECTAO75443 2155 aa5.82□□□□□ -1.48
HTT-211ENST00000513326 NAV1Q8NEY1 1877 aa5.81□□□□□ -1.48
HTT-211ENST00000513326 PTPRCP08575 1304 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms