RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
PDPN-210ENST00000513143 PDLIM7Q9NR12 457 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
PDPN-210ENST00000513143 RRN3P2A6NIE6 340 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 KBTBD13C9JR72 458 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 DGAT1O75907 488 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 SMIM10L2AP0DMW4 78 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 SMIM10L2BP0DMW5 78 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 CASP1P29466 404 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 GJA8P48165 433 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 PPFIA1Q13136 1202 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 GIT2Q14161 759 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 SPATA20Q8TB22 786 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 TIPINQ9BVW5 301 aa13.92□□□□□ -0.18
PDPN-210ENST00000513143 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
PDPN-210ENST00000513143 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
PDPN-210ENST00000513143 IGKV6-21A0A0C4DH24 114 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 NPHP3-ACAD11A0A0J9YXS1 232 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 USO1O60763 962 aaKnown RBP13.91□□□□□ -0.18
PDPN-210ENST00000513143 MAFO75444 373 aaPredicted RBP13.91□□□□□ -0.18
PDPN-210ENST00000513143 CAPN2P17655 700 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 HOXC8P31273 242 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
PDPN-210ENST00000513143 POLGP54098 1239 aaPredicted RBP13.91□□□□□ -0.18
PDPN-210ENST00000513143 ADAM17P78536 824 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 GRIK4Q16099 956 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 MCPH1Q8NEM0 835 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 TRAPPC12Q8WVT3 735 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
PDPN-210ENST00000513143 GLT1D1Q96MS3 346 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 ATP6V0A4Q9HBG4 840 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 XPNPEP1Q9NQW7 623 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 GRIN2DO15399 1336 aa13.91□□□□□ -0.18
PDPN-210ENST00000513143 PVALEFA0A1B0GWK0 134 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 A0A1W2PQ45 241 aaPredicted RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 A0A1W2PQY0 241 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 MAGEB2O15479 319 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 GAS2O43903 313 aaKnown RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 KLRC4O43908 158 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 SMC2O95347 1197 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 C22orf31O95567 290 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 KLRC1P26715 233 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 IGBP1P78318 339 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 ASIC1P78348 528 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 MAPK7Q13164 816 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 EMC2Q15006 297 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 MARCH8Q5T0T0 291 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 UNC13DQ70J99 1090 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 C7orf31Q8N865 590 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 GSDMAQ96QA5 445 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
PDPN-210ENST00000513143 SETD4Q9NVD3 440 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
PDPN-210ENST00000513143 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.19
PDPN-210ENST00000513143 HIP1RO75146 1068 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 RPN1P04843 607 aaKnown RBP13.9□□□□□ -0.19
PDPN-210ENST00000513143 GNAT1P11488 350 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 ZNF131P52739 623 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 PTPN11Q06124 597 aaPredicted RBP13.9□□□□□ -0.19
PDPN-210ENST00000513143 RAD51AP2Q09MP3 1159 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 HIC1Q14526 733 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 KCNB1Q14721 858 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 DAW1Q8N136 415 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 PPP1R13LQ8WUF5 828 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 STARD7Q9NQZ5 370 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 PANK4Q9NVE7 773 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.19
PDPN-210ENST00000513143 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 RHOBTB3O94955 611 aa13.89□□□□□ -0.19
PDPN-210ENST00000513143 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms