RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SKA1Q96BD8 255 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 KIF12Q96FN5 646 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 BHMT2Q9H2M3 363 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 JPH1Q9HDC5 661 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 TUFT1Q9NNX1 390 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 DAGLAQ9Y4D2 1042 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 FLT1P17948 1338 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MSCO60682 206 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CHEK2O96017 543 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CD58P19256 250 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CCNE1P24864 410 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 IRX4P78413 519 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CDK17Q00537 523 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PNOCQ13519 176 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PFKFB3Q16875 520 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 SBK1Q52WX2 424 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CYP4A22Q5TCH4 519 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MEI1Q5TIA1 1274 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 GKAP1Q5VSY0 366 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 ANKRD20A3Q5VUR7 823 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 DARS2Q6PI48 645 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 KCTD17Q8N5Z5 321 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 RDM1Q8NG50 284 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 FAM76AQ8TAV0 307 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 RASGRP4Q8TDF6 673 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CEP95Q96GE4 821 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TRIM54Q9BYV2 358 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 POLR3FQ9H1D9 316 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 STN1Q9H668 368 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 UBE2TQ9NPD8 197 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 OLFML3Q9NRN5 406 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TJP2Q9UDY2 1190 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 STK36Q9NRP7 1315 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 IPO5O00410 1097 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 CLGNO14967 610 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 EGFRP00533 1210 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MCAMP43121 646 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 RABGGTAQ92696 567 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TRIM31Q9BZY9 425 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 HAUS4Q9H6D7 363 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 HMX1Q9NP08 348 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 GDAQ9Y2T3 454 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 JRKLQ9Y4A0 524 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 DCCP43146 1447 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PNPLA7Q6ZV29 1317 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 A8MXQ7 604 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 KRIT1O00522 736 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CLIC2O15247 247 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CALB1P05937 261 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 RHOXF2BP0C7M4 288 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CYP2C9P11712 490 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 RAG1P15918 1043 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DEFB115Q30KQ5 88 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 KAZNQ674X7 775 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 KLC3Q6P597 504 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DDX53Q86TM3 631 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 DYDC2Q96IM9 177 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 RHOXF2Q9BQY4 288 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ERAP1Q9NZ08 941 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SGK1O00141 431 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZW10O43264 779 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PRKCBP05771 671 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 INHBAP08476 426 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CYP21A2P08686 494 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SLFN14P0C7P3 912 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PCSK1P29120 753 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ALDH7A1P49419 539 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 COPB1P53618 953 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 BAATQ14032 418 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 SEPT6Q14141 434 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 MESDQ14696 234 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DUOXA2Q1HG44 320 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TRIM72Q6ZMU5 477 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 USP28Q96RU2 1077 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TUBGCP2Q9BSJ2 902 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 STARD7Q9NQZ5 370 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CAMSAP1Q5T5Y3 1602 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 IQSEC2Q5JU85 1478 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZC3H4Q9UPT8 1303 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 POTEB3A0JP26 581 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 KCNK3O14649 394 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 RNF40O75150 1001 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ATP2C2O75185 946 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 RBP5P82980 135 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TAF11Q15544 211 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 MAPRE1Q15691 268 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 POTEBQ6S5H4 581 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SCARA5Q6ZMJ2 495 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 COL23A1Q86Y22 540 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 SMAP1Q8IYB5 467 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 CCDC170Q8IYT3 715 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 RILPQ96NA2 401 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SPZ1Q9BXG8 430 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 LSG1Q9H089 658 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 THAP9Q9H5L6 903 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 NFU1Q9UMS0 254 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ITM2BQ9Y287 266 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DAAM1Q9Y4D1 1078 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms