RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 POLMQ9NP87 494 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 YBX2Q9Y2T7 364 aaKnown RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 CYTH3O43739 400 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 IQCF3P0C7M6 154 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
TRIO-220ENST00000512979 EIF4BP23588 611 aaKnown RBP10.89□□□□□ -0.67
TRIO-220ENST00000512979 RFC2P35250 354 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 ANTXR2P58335 489 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 TRAF1Q13077 416 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 PGM5Q15124 567 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 PTGISQ16647 500 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 FCHSD1Q86WN1 690 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 MB21D2Q8IYB1 491 aaPredicted RBP10.89□□□□□ -0.67
TRIO-220ENST00000512979 SAMD3Q8N6K7 520 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 USP38Q8NB14 1042 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 IL31RAQ8NI17 732 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 MAP4K1Q92918 833 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 RBM8AQ9Y5S9 174 aaKnown RBP10.89□□□□□ -0.67
TRIO-220ENST00000512979 MYH6P13533 1939 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 MYO9BQ13459 2157 aa10.89□□□□□ -0.67
TRIO-220ENST00000512979 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 SPINT1O43278 529 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 RGS20O76081 388 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 ZNF286BP0CG31 522 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 ACTN1P12814 892 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 MYOGP15173 224 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 CCND2P30279 289 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 CTSOP43234 321 aaPredicted RBP10.88□□□□□ -0.67
TRIO-220ENST00000512979 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
TRIO-220ENST00000512979 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 DHX37Q8IY37 1157 aaKnown RBP10.88□□□□□ -0.67
TRIO-220ENST00000512979 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 CAGE1Q8TC20 777 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 IGDCC4Q8TDY8 1250 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 PPM1EQ8WY54 764 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 MYL10Q9BUA6 226 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 KATNAL1Q9BW62 490 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRIO-220ENST00000512979 ACBD3Q9H3P7 528 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 CAPN10Q9HC96 672 aa10.88□□□□□ -0.67
TRIO-220ENST00000512979 GPC6Q9Y625 555 aaPredicted RBP10.88□□□□□ -0.67
TRIO-220ENST00000512979 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
TRIO-220ENST00000512979 DDAH1O94760 285 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 GGPS1O95749 300 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 F2P00734 622 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 UBA1P22314 1058 aaKnown RBP10.87□□□□□ -0.67
TRIO-220ENST00000512979 ARSDP51689 593 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 POU4F2Q12837 409 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 ADGRE1Q14246 886 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
TRIO-220ENST00000512979 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 ZNF654Q8IZM8 581 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 C7orf31Q8N865 590 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
TRIO-220ENST00000512979 AFAP1L1Q8TED9 768 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 DHX38Q92620 1227 aaKnown RBP10.87□□□□□ -0.67
TRIO-220ENST00000512979 HPS1Q92902 700 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 CCDC74AQ96AQ1 378 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 CTAGE1Q96RT6 745 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 LY9Q9HBG7 655 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 HDAC6Q9UBN7 1215 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 GTF2IRD1Q9UHL9 959 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 PCDHA11Q9Y5I1 949 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 A0A0C4DFX4 3053 aa10.87□□□□□ -0.67
TRIO-220ENST00000512979 KIAA1217Q5T5P2 1943 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 PRC1O43663 620 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 HOXD8P13378 290 aaPredicted RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 SELPP16109 830 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 ATP4AP20648 1035 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 KIF5BP33176 963 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 IRS1P35568 1242 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 SP2Q02086 613 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 TRIP4Q15650 581 aaPredicted RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 HSDL1Q3SXM5 330 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 XKR5Q6UX68 686 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 LRRC8DQ7L1W4 858 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 ZNF438Q7Z4V0 828 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 EPS8L3Q8TE67 593 aaKnown RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 MAP3K14Q99558 947 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 LSG1Q9H089 658 aaKnown RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 MLXIPQ9HAP2 919 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms