RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 TDRD7Q8NHU6 1098 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 GSDMBQ8TAX9 411 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 LMBR1Q8WVP7 490 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 BRI3BPQ8WY22 251 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SSH1Q8WYL5 1049 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 FAM163AQ96GL9 167 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 PLPPR2Q96GM1 343 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ACSBG1Q96GR2 724 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 MAELQ96JY0 434 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 MRGPRX3Q96LB0 322 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 C7orf26Q96N11 449 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 YME1L1Q96TA2 773 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PYM1Q9BRP8 204 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 ARHGAP39Q9C0H5 1083 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ADAM19Q9H013 955 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SIL1Q9H173 461 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PREBQ9HCU5 417 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 BRD7Q9NPI1 651 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 DCP1AQ9NPI6 582 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 MBIPQ9NS73 344 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 OXSMQ9NWU1 459 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 DNAJC28Q9NX36 388 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TLR7Q9NYK1 1049 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 DIP2BQ9P265 1576 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 GTF3C4Q9UKN8 822 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TRIM33Q9UPN9 1127 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 AXIN2Q9Y2T1 843 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 COQ6Q9Y2Z9 468 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 EMC9Q9Y3B6 208 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ZNF711Q9Y462 761 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 DAGLAQ9Y4D2 1042 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PCDHA8Q9Y5H6 950 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PCDHA11Q9Y5I1 949 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TLL2Q9Y6L7 1015 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 UHRF1BP1LA0JNW5 1464 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 CCDC66A2RUB6 948 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 PI4KAP2A4QPH2 592 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 GOLGA6L3A6NEY3 463 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SPDYE3A6NKU9 549 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 GOLGA8CPA6NN73 597 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ACKR2O00590 384 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 APOL1O14791 398 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 NDUFS2O75306 463 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 URI1O94763 535 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 RTN3O95197 1032 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 PAPLNO95428 1278 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 CCDC159P0C7I6 412 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ALOX15P16050 662 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TSHRP16473 764 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 AGXTP21549 392 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ALAS2P22557 587 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ATP5DP30049 168 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 LSP1P33241 339 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SOX18P35713 384 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 HNF4AP41235 474 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 HSPA7P48741 367 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 AGFG1P52594 562 aaKnown RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 ITGA8P53708 1063 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SH3BGRP55822 239 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TLE2Q04725 743 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 PCDH1Q08174 1060 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 GALNT1Q10472 559 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TRIM32Q13049 653 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 IFT88Q13099 833 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 MAPK7Q13164 816 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 PLS1Q14651 629 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SMAD2Q15796 467 aaKnown RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TIGD6Q17RP2 521 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 FAM110CQ1W6H9 321 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 MPEG1Q2M385 716 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ADCK5Q3MIX3 580 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ZMYM1Q5SVZ6 1142 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 DCAF15Q66K64 600 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 JMJD6Q6NYC1 403 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TATDN1Q6P1N9 297 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 MAEAQ7L5Y9 396 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 HDXQ7Z353 690 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SIAH1Q8IUQ4 282 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SLC44A2Q8IWA5 706 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 TMEM192Q8IY95 271 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 NAT8LQ8N9F0 302 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 TMEM145Q8NBT3 493 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SIMC1Q8NDZ2 872 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 PPP1R14CQ8TAE6 165 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 SPATA18Q8TC71 538 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ADAMTS15Q8TE58 950 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 TGFBRAP1Q8WUH2 860 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 DCAF4Q8WV16 495 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 RFFLQ8WZ73 363 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 HTRA1Q92743 480 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 BRF1Q92994 677 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 MUL1Q969V5 352 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 CCDC140Q96MF4 163 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 ZIC5Q96T25 663 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 CGRRF1Q99675 332 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 LRFN3Q9BTN0 628 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 C22orf23Q9BZE7 217 aa3.73□□□□□ -1.81
PVT1-202ENST00000512617 NOL6Q9H6R4 1146 aaKnown RBP3.73□□□□□ -1.81
PVT1-202ENST00000512617 CNTD2Q9H8S5 307 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms