RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.33
PRDM16-207ENST00000512462 GABBR1Q9UBS5 961 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.34
PRDM16-207ENST00000512462 NFIBO00712 420 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 INPP5BP32019 993 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 CASP5P51878 434 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.34
PRDM16-207ENST00000512462 PDXDC1Q6P996 788 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 HOOK3Q86VS8 718 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 HAUS1Q96CS2 278 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 PLCB1Q9NQ66 1216 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 ARHGAP20Q9P2F6 1191 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.34
PRDM16-207ENST00000512462 EMSYQ7Z589 1322 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 PDIA5Q14554 519 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 SLC35G1Q2M3R5 365 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 SPATA4Q8NEY3 305 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 FAM213AQ9BRX8 229 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 MYH3P11055 1940 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 GOLGA8SH3BPF8 625 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 HERVK_113P62684 666 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 ECM1Q16610 540 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 HP1BP3Q5SSJ5 553 aaPredicted RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 THNSL1Q8IYQ7 743 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 L2HGDHQ9H9P8 463 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 MTUS1Q9ULD2 1270 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 CSADQ9Y600 493 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 NRAPQ86VF7 1730 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 LIG3P49916 1009 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 TFAMQ00059 246 aaKnown RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 PDCLQ13371 301 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 NLRP4Q96MN2 994 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
PRDM16-207ENST00000512462 PLVAPQ9BX97 442 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 CEP72Q9P209 647 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
PRDM16-207ENST00000512462 COL1A1P02452 1464 aaPredicted RBP12.94□□□□□ -0.34
PRDM16-207ENST00000512462 A0A1W2PQC6 194 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 EML1O00423 815 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 UCHL3P15374 230 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 PTK2Q05397 1052 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 PI4K2AQ9BTU6 479 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 RBM12Q9NTZ6 932 aaKnown RBP12.94□□□□□ -0.34
PRDM16-207ENST00000512462 DMGDHQ9UI17 866 aaKnown RBP12.94□□□□□ -0.34
PRDM16-207ENST00000512462 SNX24Q9Y343 169 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 USP11P51784 963 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 DYNLT1P63172 113 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
PRDM16-207ENST00000512462 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 ZNF365Q70YC5 407 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRDM16-207ENST00000512462 OTUD6BQ8N6M0 293 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
PRDM16-207ENST00000512462 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.344e-11■■□□□ 14.5
PRDM16-207ENST00000512462 MYZAPP0CAP1 466 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 PRPF38AQ8NAV1 312 aaKnown RBP12.93□□□□□ -0.34
PRDM16-207ENST00000512462 SCFD1Q8WVM8 642 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 MYCBPQ99417 103 aaPredicted RBP12.93□□□□□ -0.34
PRDM16-207ENST00000512462 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
PRDM16-207ENST00000512462 TUBBP07437 444 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 PLA2G4AP47712 749 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 PDE6CP51160 858 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 MNAT1P51948 309 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 NT5DC1Q5TFE4 455 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 OR2W6PQ8NHA6 318 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 MLXIPLQ9NP71 852 aa12.93□□□□□ -0.34
PRDM16-207ENST00000512462 TYW1Q9NV66 732 aaKnown RBP12.93□□□□□ -0.34
PRDM16-207ENST00000512462 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms