RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 EHD2Q9NZN4 543 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GCNT4Q9P109 453 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 ZBTB21Q9ULJ3 1066 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 ZMYM2Q9UBW7 1377 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 KIF4AO95239 1232 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GLI1P08151 1106 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 H2AFZP0C0S5 128 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 BCRP11274 1271 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 TNNC1P63316 161 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 PAK2Q13177 524 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 TCERG1LQ5VWI1 586 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 H2AFVQ71UI9 128 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 HS2ST1Q7LGA3 356 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 SLC30A5Q8TAD4 765 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 ACER1Q8TDN7 264 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 SCFD2Q8WU76 684 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GMLQ99445 158 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 STK33Q9BYT3 514 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 SMARCAL1Q9NZC9 954 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 PSME4Q14997 1843 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 GOLGA6CA6NDK9 693 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 CLIC2O15247 247 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 PPP1R37O75864 691 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 CCDC172P0C7W6 258 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 GOLGA6DP0CG33 693 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 ZBTB48P10074 688 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 MAPTP10636 758 aaKnown RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 RFX1P22670 979 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 POLD1P28340 1107 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 FMO5P49326 533 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 NIPA1Q7RTP0 329 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 FAM178BQ8IXR5 827 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 IQCKQ8N0W5 287 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 C1orf131Q8NDD1 294 aaKnown RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 FAM76AQ8TAV0 307 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 GOLGA6AQ9NYA3 693 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 SUCLA2Q9P2R7 463 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF70Q9UC06 446 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-210ENST00000512332 FEM1BQ9UK73 627 aa10.08□□□□□ -0.8
CPNE4-210ENST00000512332 SFI1A8K8P3 1242 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 DDX3XO00571 662 aaKnown RBP eCLIP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 PPIP5K2O43314 1243 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 HEXIM1O94992 359 aaKnown RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 LMNB1P20700 586 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 NMT1P30419 496 aaKnown RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 CHRNA5P30532 468 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 SOX5P35711 763 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 HSD17B4P51659 736 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 GHRHRQ02643 423 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 ALCAMQ13740 583 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 MSL1Q68DK7 614 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 LRRC31Q6UY01 552 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 RIN2Q8WYP3 895 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 VTI1AQ96AJ9 217 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 SYT11Q9BT88 431 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 TEKT3Q9BXF9 490 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 AGPAT3Q9NRZ7 376 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 STXBP5LQ9Y2K9 1186 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 FRMD4BQ9Y2L6 1034 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 SMCHD1A6NHR9 2005 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 CNTNAP1P78357 1384 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 TCP10L2B9ZVM9 353 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 BHMG1C9JSJ3 638 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 F8VZ95 297 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 CCDC188H7C350 402 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 HSF2BPO75031 334 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 ENOX2Q16206 610 aaKnown RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 EMC10Q5UCC4 262 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 FAM83AQ86UY5 434 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 CD302Q8IX05 232 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 RASGEF1CQ8N431 466 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 MXRA8Q9BRK3 442 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 UNC45AQ9H3U1 944 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 EPB41L5Q9HCM4 733 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 TTC7AQ9ULT0 858 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-210ENST00000512332 LOXHD1Q8IVV2 1947 aa10.07□□□□□ -0.8
CPNE4-210ENST00000512332 KCNK3O14649 394 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 EVI5O60447 810 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 ARP10275 920 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 PTGER2P43116 358 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 NOP2P46087 812 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 CARSP49589 748 aaKnown RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 MCCD1P59942 119 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-210ENST00000512332 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
CPNE4-210ENST00000512332 ZC2HC1CQ53FD0 456 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms