RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
NUP54-211ENST00000512151 CXCL14O95715 111 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 INSRRP14616 1297 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 CA8P35219 290 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 HAND2P61296 217 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 FAM189BP81408 668 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 ALX1Q15699 326 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 SLC35G1Q2M3R5 365 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 CCDC149Q6ZUS6 474 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 SLC24A5Q71RS6 500 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 TBC1D10CQ8IV04 446 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 SLC44A3Q8N4M1 653 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 PCYT2Q99447 389 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 AMNQ9BXJ7 453 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 ATP6V0A4Q9HBG4 840 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 KDM3AQ9Y4C1 1321 aa10.54□□□□□ -0.72
NUP54-211ENST00000512151 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.53□□□□□ -0.72
NUP54-211ENST00000512151 DENND3A2RUS2 1198 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 NT5C1B-RDH14C9J2C7 533 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 SLC30A4O14863 429 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 FIBPO43427 364 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 ATP9AO75110 1047 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 FGAP02671 866 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 MS4A1P11836 297 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 KRT17Q04695 432 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 DSC3Q14574 896 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 ST13P5Q8NFI4 369 aaPredicted RBP10.53□□□□□ -0.72
NUP54-211ENST00000512151 PJA1Q8NG27 643 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 EXOC6Q8TAG9 804 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 ZBP1Q9H171 429 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 EPC1Q9H2F5 836 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 C1orf112Q9NSG2 853 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 TMEM161AQ9NX61 479 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 MAP3K20Q9NYL2 800 aaKnown RBP10.53□□□□□ -0.72
NUP54-211ENST00000512151 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.53□□□□□ -0.72
NUP54-211ENST00000512151 PATJQ8NI35 1801 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 FRYQ5TBA9 3013 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 NEDD4P46934 1319 aa10.53□□□□□ -0.72
NUP54-211ENST00000512151 GCOM1H8Y6P7 765 aaPredicted RBP10.52□□□□□ -0.72
NUP54-211ENST00000512151 M0QZ92 97 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 LILRB5O75023 590 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 POLR2MP0CAP2 368 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 SRFP11831 508 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 PMLP29590 882 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 PPM1AP35813 382 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 KRT76Q01546 638 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 CSTF1Q05048 431 aaKnown RBP10.52□□□□□ -0.72
NUP54-211ENST00000512151 DMWDQ09019 674 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 LETM2Q2VYF4 491 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 ZNF528Q3MIS6 628 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 GNPTABQ3T906 1256 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 CABP7Q86V35 215 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.72
NUP54-211ENST00000512151 DGKHQ86XP1 1220 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 ZBTB44Q8NCP5 570 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 PI4K2BQ8TCG2 481 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 MYADMQ96S97 322 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 ANGPTL2Q9UKU9 493 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 ST3GAL5Q9UNP4 418 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 GINS2Q9Y248 185 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 MTF2Q9Y483 593 aaPredicted RBP10.52□□□□□ -0.72
NUP54-211ENST00000512151 PCDHA2Q9Y5H9 948 aa10.52□□□□□ -0.72
NUP54-211ENST00000512151 MIA3Q5JRA6 1907 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 IGF2RP11717 2491 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.73
NUP54-211ENST00000512151 RRN3P2A6NIE6 340 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 RPS6KA5O75582 802 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 KCNA2P16389 499 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 METAP2P50579 478 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP54-211ENST00000512151 WTAPQ15007 396 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 PLCB4Q15147 1175 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 CLLU1OSQ5K130 101 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 VPS52Q8N1B4 723 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 OTUD7AQ8TE49 926 aaPredicted RBP10.52□□□□□ -0.73
NUP54-211ENST00000512151 BCL7CQ8WUZ0 217 aaPredicted RBP10.52□□□□□ -0.73
NUP54-211ENST00000512151 SEPT1Q8WYJ6 367 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 NELL1Q92832 810 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 GLG1Q92896 1179 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.73
NUP54-211ENST00000512151 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 SPATA6Q9NWH7 488 aaPredicted RBP10.52□□□□□ -0.73
NUP54-211ENST00000512151 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 PCDHGA2Q9Y5H1 932 aa10.52□□□□□ -0.73
NUP54-211ENST00000512151 ZBTB5O15062 677 aa10.51□□□□□ -0.73
NUP54-211ENST00000512151 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
NUP54-211ENST00000512151 SPEM2Q0P670 501 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms