RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 STAT5BP51692 787 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 MAP2K5Q13163 448 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 NOGQ13253 232 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 TRIM14Q14142 442 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 LRRC41Q15345 812 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 TMC6Q7Z403 805 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-209ENST00000511426 DAW1Q8N136 415 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 SPIRE2Q8WWL2 714 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 GPR20Q99678 358 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 TINF2Q9BSI4 451 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 STRA6Q9BX79 667 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 ATP6V0A4Q9HBG4 840 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 INTS13Q9NVM9 706 aa16.78■□□□□ 0.28
SCLT1-209ENST00000511426 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 CETN3O15182 167 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 CA12O43570 354 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 PPP1R37O75864 691 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
SCLT1-209ENST00000511426 PBX1P40424 430 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 SMTNP53814 917 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 PPP2R3AQ06190 1150 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 LY6KQ17RY6 165 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 UTP14CQ5TAP6 766 aaKnown RBP16.77■□□□□ 0.28
SCLT1-209ENST00000511426 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 GLIS3Q8NEA6 775 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 NTPCRQ9BSD7 190 aaKnown RBP16.77■□□□□ 0.28
SCLT1-209ENST00000511426 TUBGCP2Q9BSJ2 902 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 SEPT9Q9UHD8 586 aaPredicted RBP16.77■□□□□ 0.28
SCLT1-209ENST00000511426 CPA4Q9UI42 421 aa16.77■□□□□ 0.28
SCLT1-209ENST00000511426 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■□ 19.3
SCLT1-209ENST00000511426 ZNFX1Q9P2E3 1918 aaKnown RBP16.76■□□□□ 0.27
SCLT1-209ENST00000511426 SLC16A3O15427 465 aaKnown RBP16.76■□□□□ 0.27
SCLT1-209ENST00000511426 ARIH2O95376 493 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 GH1P01241 217 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 NCKAP1LP55160 1127 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 SP4Q02446 784 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-209ENST00000511426 HSP90AA4PQ58FG1 418 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 CCDC112Q8NEF3 446 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-209ENST00000511426 SPATA33Q96N06 139 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 JPH2Q9BR39 696 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-209ENST00000511426 KATNBL1Q9H079 304 aa16.76■□□□□ 0.27
SCLT1-209ENST00000511426 MYBP10242 640 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 CASP5P51878 434 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 MAN2A1Q16706 1144 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 OLFML2BQ68BL8 750 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 PLA2G4FQ68DD2 849 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 LRRC8AQ8IWT6 810 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 SLC7A3Q8WY07 619 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 MKNK1Q9BUB5 465 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 FGFBP2Q9BYJ0 223 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 BCAS3Q9H6U6 928 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 METTL14Q9HCE5 456 aaKnown RBP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 FAM184BQ9ULE4 1060 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 TPM1P09493 284 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 PTGS1P23219 599 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 RGS2P41220 211 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 MTIF2P46199 727 aaKnown RBP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 NPEPPSP55786 919 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 GTF2BQ00403 316 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 TBX2Q13207 712 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 PPP2R5AQ15172 486 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 TARBP2Q15633 366 aaKnown RBP16.75■□□□□ 0.27
SCLT1-209ENST00000511426 CCDC144BQ3MJ40 725 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 NELFCDQ8IXH7 590 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 RETREG2Q8NC44 543 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 PPTC7Q8NI37 304 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 USP6NLQ92738 828 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 PCYT2Q99447 389 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 GBP3Q9H0R5 595 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 EXOC7Q9UPT5 735 aa16.75■□□□□ 0.27
SCLT1-209ENST00000511426 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 K7ENM7 598 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 PRPF6O94906 941 aaKnown RBP16.74■□□□□ 0.27
SCLT1-209ENST00000511426 SNAI1O95863 264 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-209ENST00000511426 NR2F2P24468 414 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 POLGP54098 1239 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-209ENST00000511426 ADAM9Q13443 819 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 HSDL1Q3SXM5 330 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 FKBP15Q5T1M5 1219 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 FRMD5Q7Z6J6 570 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 C12orf56Q8IXR9 622 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 ATP8B4Q8TF62 1192 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 ACCSQ96QU6 501 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 APBA2Q99767 749 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms