RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PABPC1LQ4VXU2 614 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 KRT79Q5XKE5 535 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CD302Q8IX05 232 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DBF4BQ8NFT6 615 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DEPDC1BQ8WUY9 529 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GOLGA1Q92805 767 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RIOK1Q9BRS2 568 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SH3GLB2Q9NR46 395 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PXMP2Q9NR77 195 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PRMT7Q9NVM4 692 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 HDAC6Q9UBN7 1215 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 G3BP2Q9UN86 482 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 FRMPD2Q68DX3 1309 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 COL11A2P13942 1736 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM8BA6NDV4 472 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CAPN9O14815 690 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ADAMTS4O75173 837 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 LMNAP02545 664 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SMIM10L2AP0DMW4 78 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SMIM10L2BP0DMW5 78 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GHRP10912 638 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GLUD2P49448 558 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 USP11P51784 963 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 WDR5P61964 334 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PSMC5P62195 406 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 YWHAEP62258 255 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 NKX3-2P78367 333 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RBL2Q08999 1139 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CETN1Q12798 172 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TDGQ13569 410 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GRM4Q14833 912 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 GRIN2CQ14957 1233 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 LRCH2Q5VUJ6 765 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DLK2Q6UY11 383 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 LRRC69Q6ZNQ3 347 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 Q7L0L9 218 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 CHD1LQ86WJ1 897 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TTC39CQ8N584 583 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SYTL5Q8TDW5 730 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PANK1Q8TE04 598 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SPATA32Q96LK8 384 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 DDX50Q9BQ39 737 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 RTKNQ9BST9 563 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 NIFKQ9BYG3 293 aaKnown RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 TRPV6Q9H1D0 765 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ZSWIM4Q9H7M6 989 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 FBXO28Q9NVF7 368 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 AKAP7Q9P0M2 348 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF214Q9UL59 606 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 INPP5FQ9Y2H2 1132 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 PCDHA2Q9Y5H9 948 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 ATP6V1DQ9Y5K8 247 aa3.16□□□□□ -1.9
CLOCK-209ENST00000511124 SF3B1O75533 1304 aaKnown RBP eCLIP3.16□□□□□ -1.9
CLOCK-209ENST00000511124 INO80B-WBP1J3KQ70 363 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 DEXIO95424 95 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 GNSP15586 552 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 IFNAR2P48551 515 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 CDK7P50613 346 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 HAND2P61296 217 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 RPL10AP62906 217 aaKnown RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 BIRC2Q13490 618 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 HDAC1Q13547 482 aaPredicted RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 MAPRE1Q15691 268 aaKnown RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 MAPK6Q16659 721 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 UVSSAQ2YD98 709 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 FBXO43Q4G163 708 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 CEP55Q53EZ4 464 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 XKR9Q5GH70 373 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 NOMO2Q5JPE7 1267 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ERICH6BQ5W0A0 696 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF280DQ6N043 979 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 TRIM67Q6ZTA4 783 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ANKS3Q6ZW76 656 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF654Q8IZM8 581 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 REPS2Q8NFH8 660 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 MRPS31Q92665 395 aaKnown RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 AGBL1Q96MI9 1066 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 PHF20Q9BVI0 1012 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 NT5C3AQ9H0P0 336 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 SPATA6Q9NWH7 488 aaPredicted RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 SEPT9Q9UHD8 586 aaPredicted RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ADAMTS5Q9UNA0 930 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 MRPS23Q9Y3D9 190 aaKnown RBP3.15□□□□□ -1.9
CLOCK-209ENST00000511124 ASB3Q9Y575 518 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 CDY2AQ9Y6F7 541 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 KDM3AQ9Y4C1 1321 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 PLIN4Q96Q06 1357 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 LTBP1Q14766 1721 aa3.15□□□□□ -1.9
CLOCK-209ENST00000511124 PNMA6EA0A0J9YXQ4 647 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SMCO2A6NFE2 343 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 GRXCR2A6NFK2 248 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 GSG1L2A8MUP6 293 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 LRP3O75074 770 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CCDC192P0DO97 292 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CDK4P11802 303 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CKBP12277 381 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 XRCC6P12956 609 aaKnown RBP eCLIP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SDSP20132 328 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms