RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CPSF1Q10570 1443 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 GMNCA6NCL1 334 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 TAC1P20366 129 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 BAG6P46379 1132 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 ZC3H18Q86VM9 953 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 TTC25Q96NG3 672 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 OSBPL9Q96SU4 736 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 ZFP69BQ9UJL9 534 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 PMLP29590 882 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 TTLL11Q8NHH1 800 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 PSPC1Q8WXF1 523 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 RAD54LQ92698 747 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 AP5M1Q9H0R1 490 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 FAM96AQ9H5X1 160 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 LCMT1Q9UIC8 334 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 FNDC3AQ9Y2H6 1198 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 NOC2LQ9Y3T9 749 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 WDR64B1ANS9 1081 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 H0Y3Z8 333 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 CDR2Q01850 454 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 KLHL38Q2WGJ6 581 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 NGRNQ9NPE2 291 aaKnown RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 NEDD4P46934 1319 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 POTEMA6NI47 508 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 ZBBXA8MT70 800 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 SOX5P35711 763 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
NEK1-206ENST00000510533 FSCBQ5H9T9 825 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 HEMGNQ9BXL5 484 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 METP08581 1390 aa11.33□□□□□ -0.59
NEK1-206ENST00000510533 SRGAP2CP0DJJ0 459 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 KCNH2Q12809 1159 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 TFDP2Q14188 446 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 FOXP4Q8IVH2 680 aaPredicted RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 PYGBP11216 843 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 NFRKBQ6P4R8 1299 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 RNF139Q8WU17 664 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 JAK3P52333 1124 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 KIF19Q2TAC6 998 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 XXYLT1Q8NBI6 393 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 KIF9Q9HAQ2 790 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 EPHB1P54762 984 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 Q3C1V9 767 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 PPP6R3Q5H9R7 873 aaPredicted RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 ICE2Q659A1 982 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 CYB5R4Q7L1T6 521 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 DCAF4Q8WV16 495 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 PCDHA6Q9UN73 950 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 PCDHA8Q9Y5H6 950 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.6
NEK1-206ENST00000510533 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
NEK1-206ENST00000510533 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 PAMP19021 973 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 RCAN1P53805 252 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 SNAP25P60880 206 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 COASYQ13057 564 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■□□□□ 9.9
NEK1-206ENST00000510533 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 NCK2O43639 380 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 HAUS5O94927 633 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 NLRP14Q86W24 1093 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 DHX40Q8IX18 779 aaKnown RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 ZC3H15Q8WU90 426 aaKnown RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 EXT2Q93063 718 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 KIAA1586Q9HCI6 787 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 KPNA7A9QM74 516 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 ZBTB5O15062 677 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 GCLMP48507 274 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 CALB1P05937 261 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 CHRNA3P32297 505 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 PRELPP51888 382 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms