RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	GGPS1	O95749	300 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	SNAI1	O95863	264 aa	Predicted RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	GAP43	P17677	238 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	EEF1G	P26641	437 aa	Known RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	KLK7	P49862	253 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	PRKCE	Q02156	737 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	LRRC63	Q05C16	580 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	SPAG1	Q07617	926 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	GRB14	Q14449	540 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	GJC2	Q5T442	439 aa	Predicted RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	TAPT1	Q6NXT6	567 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	MIS18BP1	Q6P0N0	1132 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	FOXR2	Q6PJQ5	311 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	ARMCX2	Q7L311	632 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZNF720	Q7Z2F6	126 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	PHF12	Q96QT6	1004 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	MRPL44	Q9H9J2	332 aa	Known RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	PARVG	Q9HBI0	331 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	XPNPEP1	Q9NQW7	623 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	PDLIM7	Q9NR12	457 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	OLFML3	Q9NRN5	406 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	ODF2L	Q9ULJ1	636 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	COL4A3BP	Q9Y5P4	624 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	MYH11	P35749	1972 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	MANSC4	A6NHS7	340 aa	Predicted RBP	11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	LGALS16	A8MUM7	142 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411		B4DLN1	442 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	N4BP3	O15049	544 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	GALR2	O43603	387 aa	Predicted RBP	11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	TPM3	P06753	285 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	CCNA1	P78396	465 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	KNOP1	Q1ED39	458 aa	Known RBP	11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	FAM110C	Q1W6H9	321 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	CELF3	Q5SZQ8	465 aa	Known RBP	11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	TMEM139	Q8IV31	216 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	TC2N	Q8N9U0	490 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	KIAA1524	Q8TCG1	905 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	GPR20	Q99678	358 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	TUBGCP2	Q9BSJ2	902 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZNF302	Q9NR11	478 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	KCND2	Q9NZV8	630 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	TRAF3IP3	Q9Y228	551 aa		11.16	□□□□□ -0.62
FBXO38-215	ENST00000509411	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	RBM47	A0AV96	593 aa	Known RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	TISP43	B9A030	160 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CLIC2	O15247	247 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZNF500	O60304	480 aa	Predicted RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CTGF	P29279	349 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	TM4SF4	P48230	202 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CASP4	P49662	377 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	RBL2	Q08999	1139 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	NEDD9	Q14511	834 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	HSDL1	Q3SXM5	330 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	MTERF2	Q49AM1	385 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	ODR4	Q5SWX8	454 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	SPECC1L	Q69YQ0	1117 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	C17orf99	Q6UX52	265 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	METTL7B	Q6UX53	244 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	PLEKHH3	Q7Z736	793 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	IFNL1	Q8IU54	200 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	ABRA	Q8N0Z2	381 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	PLCD3	Q8N3E9	789 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	ATP6V0A1	Q93050	837 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CEP170P1	Q96L14	293 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CTAGE1	Q96RT6	745 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	TSG101	Q99816	390 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	TMX1	Q9H3N1	280 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	TCEAL9	Q9UHQ7	104 aa		11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	DIS3	Q9Y2L1	958 aa	Known RBP	11.15	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZSWIM8	A7E2V4	1837 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ZNF236	Q9UL36	1845 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ITIH6	Q6UXX5	1313 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ASB14	A6NK59	587 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	EIF3D	O15371	548 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ADCY6	O43306	1168 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	LGR5	O75473	907 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	OAT	P04181	439 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	GYPC	P04921	128 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	TGFB3	P10600	412 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	PLS3	P13797	630 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	PRKCSH	P14314	528 aa	Predicted RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	TCF7	P36402	384 aa	Predicted RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ADCYAP1R1	P41586	468 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	MTIF2	P46199	727 aa	Known RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	FXR1	P51114	621 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ADK	P55263	362 aa	Known RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	PEX3	P56589	373 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	GSDMD	P57764	484 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	FKBP3	Q00688	224 aa	Known RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	UBXN1	Q04323	297 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	ARHGAP1	Q07960	439 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	SREBF2	Q12772	1141 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	TAF1C	Q15572	869 aa	Predicted RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	TARBP2	Q15633	366 aa	Known RBP	11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	FILIP1L	Q4L180	1135 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	VWA3B	Q502W6	1294 aa		11.14	□□□□□ -0.63
FBXO38-215	ENST00000509411	MORN1	Q5T089	497 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms