RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 IREB2P48200 963 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 RTP1P59025 263 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 MCCD1P59942 119 aaPredicted RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 ELF2Q15723 593 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 EXOC3L4Q17RC7 722 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 ASTE1Q2TB18 679 aaPredicted RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 IQCEQ6IPM2 695 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 RSRC2Q7L4I2 434 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 IL31RAQ8NI17 732 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 SECISBP2LQ93073 1101 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 SLC35C1Q96A29 364 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 DCPSQ96C86 337 aaKnown RBP10.13□□□□□ -0.79
HTT-205ENST00000509043 BORCS6Q96GS4 357 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 ALS2CR12Q96Q35 445 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 GANQ9H2C0 597 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 HOMER2Q9NSB8 354 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 CYP39A1Q9NYL5 469 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 ARHGAP20Q9P2F6 1191 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 GUCA1BQ9UMX6 200 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 JRKLQ9Y4A0 524 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 PCDHA13Q9Y5I0 950 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 CSADQ9Y600 493 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 SSC5DA1L4H1 1573 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 ZMYM2Q9UBW7 1377 aa10.13□□□□□ -0.79
HTT-205ENST00000509043 BTNL10A8MVZ5 291 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 CXCL11O14625 94 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 EPHB6O15197 1021 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 PMM2O15305 246 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 USP2O75604 605 aaPredicted RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 PSAPP07602 524 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 KRT13P13646 458 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 H2AFXP16104 143 aaPredicted RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 MCM3P25205 808 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 NMT1P30419 496 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 ICAM3P32942 547 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 NF2P35240 595 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 EIF4A3P38919 411 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 SMTNP53814 917 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 CHMP4BP1P59074 171 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 POLR2FP61218 127 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 GTF2BQ00403 316 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 AMPD2Q01433 879 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 PPATQ06203 517 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 CETN1Q12798 172 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 MAPK7Q13164 816 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 TMEM132BQ14DG7 1078 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 ASIC2Q16515 512 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 ERCC6LQ2NKX8 1250 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 KLHDC7AQ5VTJ3 777 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 HGSNATQ68CP4 663 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 LBX2Q6XYB7 198 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 INTS8Q75QN2 995 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
HTT-205ENST00000509043 VPS36Q86VN1 386 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 SULF1Q8IWU6 871 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 TSC1Q92574 1164 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 KCNN1Q92952 543 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 SPAG5Q96R06 1193 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 MPHOSPH6Q99547 160 aaKnown RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 WRAP73Q9P2S5 460 aaPredicted RBP10.12□□□□□ -0.79
HTT-205ENST00000509043 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
HTT-205ENST00000509043 LOC285556D6RIA3 1793 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 LOC102724159A0A0B4J2E5 919 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 CTAGE15A4D2H0 777 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 UNCXA6NJT0 531 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 SPATA31C2B4DYI2 1134 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 K7ENM7 598 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 DDX39AO00148 427 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 EIF3JO75822 258 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 CTAGE8P0CG41 777 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 UCHL3P15374 230 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 FERP16591 822 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 PRKCIP41743 596 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 MAGEA1P43355 309 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 NCKAP1LP55160 1127 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 KLHL30Q0D2K2 578 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 PWP2Q15269 919 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 STXBP2Q15833 593 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 SLC18A3Q16572 532 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 IFI16Q16666 785 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 TRAPPC11Q7Z392 1133 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 USP37Q86T82 979 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 CTAGE6Q86UF2 777 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms