RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SULT1E1P49888 294 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CABP4P57796 275 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SATB1Q01826 763 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 MOGSQ13724 837 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 RAB12Q6IQ22 244 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 AGMOQ6ZNB7 445 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 HEATR4Q86WZ0 1026 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 NXPE1Q8N323 547 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SRBD1Q8N5C6 995 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 MAML1Q92585 1016 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 LRRC46Q96FV0 321 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SELENOSQ9BQE4 189 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 STK31Q9BXU1 1019 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 NDEL1Q9GZM8 345 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SPDYE3A6NKU9 549 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 ZBTB7BO15156 539 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PIP5K1CO60331 668 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PGM3O95394 542 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 POLBP06746 335 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 FAM153BP0C7A2 387 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 GABPB1Q06547 395 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 GOLGA8FQ08AF8 430 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 MAPK7Q13164 816 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 INAQ16352 499 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CNSTQ6PJW8 725 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 C7orf61Q8IZ16 206 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 FAM9CQ8IZT9 166 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 DCAF5Q96JK2 942 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 FNBP1Q96RU3 617 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KIF9Q9HAQ2 790 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHGC3Q9UN70 934 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 APOBEC2Q9Y235 224 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SLC12A7Q9Y666 1083 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 QSER1Q2KHR3 1735 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SLIT2O94813 1529 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SYNJ2BP-COX16A0A087WUM0 186 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PTPDC1A2A3K4 754 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SH3D21A4FU49 640 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TRAF5O00463 557 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 KRT15P19012 456 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ATP4AP20648 1035 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 STT3AP46977 705 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 COASYQ13057 564 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CAMK2GQ13555 558 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CAMK2DQ13557 499 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 NUGGCQ68CJ6 796 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ANKRD13DQ6ZTN6 518 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 MOAP1Q96BY2 351 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TTC14Q96N46 770 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 FAM118BQ9BPY3 351 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PYM1Q9BRP8 204 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PHACTR1Q9C0D0 580 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CARD9Q9H257 536 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 MKNK2Q9HBH9 465 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 DNAJC28Q9NX36 388 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHGA1Q9Y5H4 931 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1B0GUL6 1792 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CHMP2AO43633 222 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 DKC1O60832 514 aaKnown RBP eCLIP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SLC4A1P02730 911 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PEX2P28328 305 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ACTN2P35609 894 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 RPP30P78346 268 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CACNB2Q08289 660 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PRR16Q569H4 304 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ADCK1Q86TW2 530 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ITPRIPQ8IWB1 547 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 C2orf69Q8N8R5 385 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SMARCE1Q969G3 411 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TRIM47Q96LD4 638 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 GAS2L1Q99501 681 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CITED2Q99967 270 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SACM1LQ9NTJ5 587 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 BCS1LQ9Y276 419 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SBF2Q86WG5 1849 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1W2PPL8 197 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 GMNNO75496 209 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 EIF4A1P60842 406 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SKIDA1Q1XH10 827 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 KCTD21Q4G0X4 260 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 WDR45BQ5MNZ6 344 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 HGSNATQ68CP4 663 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 BRSK2Q8IWQ3 736 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ZZZ3Q8IYH5 903 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 C8orf58Q8NAV2 365 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 MRPS27Q92552 414 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 LRRC59Q96AG4 307 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 GMLQ99445 158 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 KCTD10Q9H3F6 313 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM134Q9H6X4 195 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SLC52A2Q9HAB3 445 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 C11orf16Q9NQ32 467 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CCDC177Q9NQR7 707 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 FOXD3Q9UJU5 478 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF335Q9H4Z2 1342 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 LRP5O75197 1615 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 UTYO14607 1347 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PDGFAP04085 211 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 OSMP13725 252 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PHKG2P15735 406 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms