RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SPC25Q9HBM1 224 aa9.95□□□□□ -0.82
CHD1-205ENST00000508756 FBXO10Q9UK96 956 aa9.95□□□□□ -0.82
CHD1-205ENST00000508756 INVSQ9Y283 1065 aa9.95□□□□□ -0.82
CHD1-205ENST00000508756 PRICKLE3O43900 615 aaPredicted RBP9.94□□□□□ -0.82
CHD1-205ENST00000508756 CUTAO60888 179 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 DNAJC6O75061 913 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 APOL3O95236 402 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 ETV4P43268 484 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 PHC1P78364 1004 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHD1-205ENST00000508756 DDB1Q16531 1140 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 PHYKPLQ8IUZ5 450 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 SLC5A5Q92911 643 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 MYL10Q9BUA6 226 aa9.94□□□□□ -0.82
CHD1-205ENST00000508756 A0A0G2JNJ9 132 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 POU3F3P20264 500 aaPredicted RBP9.93□□□□□ -0.82
CHD1-205ENST00000508756 GPR158Q5T848 1215 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 BROXQ5VW32 411 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
CHD1-205ENST00000508756 LGI4Q8N135 537 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 ZNF610Q8N9Z0 462 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 ZNF496Q96IT1 587 aaPredicted RBP9.93□□□□□ -0.82
CHD1-205ENST00000508756 SCYL1Q96KG9 808 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 Q9UFV3 132 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 MAGEL2Q9UJ55 1249 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 MSRAQ9UJ68 235 aa9.93□□□□□ -0.82
CHD1-205ENST00000508756 ZEB2O60315 1214 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 PRPF6O94906 941 aaKnown RBP9.92□□□□□ -0.82
CHD1-205ENST00000508756 HMGCRP04035 888 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 LSP1P33241 339 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 RRADP55042 308 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 NFKB2Q00653 900 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 USP10Q14694 798 aaKnown RBP9.92□□□□□ -0.82
CHD1-205ENST00000508756 EIF4HQ15056 248 aaKnown RBP9.92□□□□□ -0.82
CHD1-205ENST00000508756 RNF187Q5TA31 235 aaPredicted RBP9.92□□□□□ -0.82
CHD1-205ENST00000508756 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 LARP4Q71RC2 724 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD1-205ENST00000508756 IFNL2Q8IZJ0 200 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 TEPSINQ96N21 525 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 CARD11Q9BXL7 1154 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 RTEL1Q9NZ71 1219 aa9.92□□□□□ -0.82
CHD1-205ENST00000508756 APOBEC2Q9Y235 224 aaKnown RBP9.92□□□□□ -0.82
CHD1-205ENST00000508756 B4GALT4O60513 344 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 MAFO75444 373 aaPredicted RBP9.91□□□□□ -0.82
CHD1-205ENST00000508756 EYA4O95677 639 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 STAT5BP51692 787 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 ADCY2Q08462 1091 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 STAT4Q14765 748 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 TIGD7Q6NT04 549 aaPredicted RBP9.91□□□□□ -0.82
CHD1-205ENST00000508756 UNQ6494/PRO21346Q6UXR6 183 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 BCL6BQ8N143 479 aaPredicted RBP9.91□□□□□ -0.82
CHD1-205ENST00000508756 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
CHD1-205ENST00000508756 ELL2O00472 640 aaPredicted RBP9.9□□□□□ -0.82
CHD1-205ENST00000508756 MAP3K12Q12852 859 aa9.9□□□□□ -0.82
CHD1-205ENST00000508756 KANSL1Q7Z3B3 1105 aa9.9□□□□□ -0.82
CHD1-205ENST00000508756 HDGFL2Q7Z4V5 671 aaPredicted RBP9.9□□□□□ -0.82
CHD1-205ENST00000508756 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 ANTXR2P58335 489 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 NFIXQ14938 502 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 ZFYVE27Q5T4F4 411 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 CLRN3Q8NCR9 226 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 RAPGEFL1Q9UHV5 662 aa9.89□□□□□ -0.83
CHD1-205ENST00000508756 KDM1AO60341 852 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 BRINP1O60477 761 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 CTSWP56202 376 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 TMPRSS15P98073 1019 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 TRIM68Q6AZZ1 485 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 KIAA1841Q6NSI8 718 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 ESPNLQ6ZVH7 1005 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 PLEKHH3Q7Z736 793 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 RPGRQ92834 1020 aaKnown RBP9.88□□□□□ -0.83
CHD1-205ENST00000508756 MTG2Q9H4K7 406 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 KCMF1Q9P0J7 381 aa9.88□□□□□ -0.83
CHD1-205ENST00000508756 USP36Q9P275 1121 aaKnown RBP9.88□□□□□ -0.83
CHD1-205ENST00000508756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
CHD1-205ENST00000508756 RAB11FIP3O75154 756 aa9.87□□□□□ -0.83
CHD1-205ENST00000508756 BCAR1P56945 870 aa9.87□□□□□ -0.83
CHD1-205ENST00000508756 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
CHD1-205ENST00000508756 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
CHD1-205ENST00000508756 CNOT4O95628 575 aaKnown RBP9.86□□□□□ -0.83
CHD1-205ENST00000508756 CPEP16870 476 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 DGKDQ16760 1214 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 ZNF827Q17R98 1081 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 FRMD7Q6ZUT3 714 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 RASSF3Q86WH2 238 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 CXorf67Q86X51 503 aaPredicted RBP9.86□□□□□ -0.83
CHD1-205ENST00000508756 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
CHD1-205ENST00000508756 ATL2Q8NHH9 583 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 FERMT2Q96AC1 680 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 SAE1Q9UBE0 346 aaPredicted RBP9.86□□□□□ -0.83
CHD1-205ENST00000508756 NOC2LQ9Y3T9 749 aaKnown RBP9.86□□□□□ -0.83
CHD1-205ENST00000508756 SLC4A7Q9Y6M7 1214 aa9.86□□□□□ -0.83
CHD1-205ENST00000508756 LAMTOR5O43504 91 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 ULK1O75385 1050 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 MRE11P49959 708 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms