RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 MTMR1Q13613 665 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TDRD12Q587J7 1177 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 RUSC1Q9BVN2 902 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 FGFBP2Q9BYJ0 223 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 HOMER2Q9NSB8 354 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 ZNF263O14978 683 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 PJA2O43164 708 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 CHMP2AO43633 222 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SERPING1P05155 500 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 PRLRP16471 622 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 MAGEA1P43355 309 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 ZNF131P52739 623 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 VSNL1P62760 191 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SFR1Q86XK3 245 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 LXNQ9BS40 222 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 LSM14BQ9BX40 385 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TSKSQ9UJT2 592 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 UBE4BO95155 1302 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 POLR3GO15318 223 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 CALUO43852 315 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 STAM2O75886 525 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 TCP1P17987 556 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 RAD51AP2Q09MP3 1159 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 ADAM9Q13443 819 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 NFIL3Q16649 462 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 SNRNP48Q6IEG0 339 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 MOB2Q70IA6 237 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 VSIG10LQ86VR7 867 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 RNF10Q8N5U6 811 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 RDM1Q8NG50 284 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 RUBCNQ92622 972 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 GPRASP2Q96D09 838 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 CAPZA3Q96KX2 299 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 MMS19Q96T76 1030 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
PRPF40B-203ENST00000508736 CCDC66A2RUB6 948 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 NR2F2P24468 414 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 SFNP31947 248 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 ITIH3Q06033 890 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 VGLL4Q14135 290 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 NSMFQ6X4W1 530 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 FRMD5Q7Z6J6 570 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 NSUN6Q8TEA1 469 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 PARVGQ9HBI0 331 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-203ENST00000508736 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 SRGAP2O75044 1071 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 FAM13AO94988 1023 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CCND2P30279 289 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CASP5P51878 434 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 JAK3P52333 1124 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 POLR2FP61218 127 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 KRT76Q01546 638 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 HSP90B2PQ58FF3 399 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ZNF572Q7Z3I7 529 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms