RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 DRP2Q13474 957 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 PIGOQ8TEQ8 1089 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 RAB34Q9BZG1 259 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 AGO3Q9H9G7 860 aaKnown RBP16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 TUFT1Q9NNX1 390 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 LOXHD1Q8IVV2 1947 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 SIP14410 1827 aa16.4■□□□□ 0.22
SH3TC1-216ENST00000508641 SZT2Q5T011 3432 aa16.39■□□□□ 0.22
SH3TC1-216ENST00000508641 ABHD14A-ACY1A0A1B0GW23 586 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 LYPLA2O95372 231 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 ATP2A2P16615 1042 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 RPA1P27694 616 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 CDC25AP30304 524 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 CD52P31358 61 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 NLRP11P59045 1033 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 SMAD3P84022 425 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 POTEGQ6S5H5 508 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 ANKEF1Q9NU02 776 aa16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 SUCLA2Q9P2R7 463 aaPredicted RBP16.39■□□□□ 0.21
SH3TC1-216ENST00000508641 IGKV6-21A0A0C4DH24 114 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 GPR32O75388 356 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 PBX2P40425 430 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 RFC5P40937 340 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 RABGGTBP53611 331 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 CRYBB1P53674 252 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 CEBPZQ03701 1054 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 HAUS3Q68CZ6 603 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 SNX29Q8TEQ0 813 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 SCLT1Q96NL6 688 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 NACC1Q96RE7 527 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 OSMRQ99650 979 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 NOC2LQ9Y3T9 749 aaKnown RBP16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 CLIC4Q9Y696 253 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 KDM3AQ9Y4C1 1321 aa16.38■□□□□ 0.21
SH3TC1-216ENST00000508641 EFCAB14O75071 495 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 XRCC6P12956 609 aaKnown RBP eCLIP16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 DEFB103AP81534 67 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 PAK2Q13177 524 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 EMC2Q15006 297 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 ZRSR1Q15695 479 aaKnown RBP16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 ECM1Q16610 540 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 KSR1Q8IVT5 923 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 EXOC8Q8IYI6 725 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 USP38Q8NB14 1042 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 TMEM40Q8WWA1 233 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 NLRP7Q8WX94 980 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 APBB2Q92870 758 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 ADAMTS10Q9H324 1103 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 DHX33Q9H6R0 707 aaKnown RBP16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 KIAA1024Q9UPX6 916 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
SH3TC1-216ENST00000508641 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 BMP15O95972 392 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 MYOGP15173 224 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 RARRES1P49788 294 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 GPC3P51654 580 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 BECN1Q14457 450 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 Q7L0L9 218 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 HERC6Q8IVU3 1022 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 PHOSPHO2Q8TCD6 241 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 PBX4Q9BYU1 374 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 SQORQ9Y6N5 450 aa16.36■□□□□ 0.21
SH3TC1-216ENST00000508641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 UPP2O95045 317 aa16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 AMHP03971 560 aa16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 ZSCAN22P10073 491 aaPredicted RBP16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 DNAJB2P25686 324 aa16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 PKP1Q13835 747 aa16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
SH3TC1-216ENST00000508641 PRPF31Q8WWY3 499 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms