RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
NR1I3-224ENST00000507215 CABP5Q9NP86 173 aa8.15□□□□□ -1.1
NR1I3-224ENST00000507215 THEGQ9P2T0 379 aa8.15□□□□□ -1.1
NR1I3-224ENST00000507215 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.1
NR1I3-224ENST00000507215 CORINQ9Y5Q5 1042 aa8.15□□□□□ -1.1
NR1I3-224ENST00000507215 FOCADQ5VW36 1801 aa8.15□□□□□ -1.11
NR1I3-224ENST00000507215 FAM170BA6NMN3 283 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 TLR3O15455 904 aaKnown RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 RARBP10826 455 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 VCAM1P19320 739 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 COPB2P35606 906 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 MRPS5P82675 430 aaKnown RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 RRP1BQ14684 758 aaKnown RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 NKG7Q16617 165 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 AAK1Q2M2I8 961 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 TRIM60Q495X7 471 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 GJC2Q5T442 439 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 TATDN1Q6P1N9 297 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 ZAR1Q86SH2 424 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 SHKBP1Q8TBC3 707 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 SH3RF3Q8TEJ3 882 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 ZNF384Q8TF68 577 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 TGFBRAP1Q8WUH2 860 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 NUP133Q8WUM0 1156 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 YIPF2Q9BWQ6 316 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 WNT10AQ9GZT5 417 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 MTIF3Q9H2K0 278 aaKnown RBP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 AATFQ9NY61 560 aaKnown RBP eCLIP8.14□□□□□ -1.11
NR1I3-224ENST00000507215 SERPINB13Q9UIV8 391 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 PCOLCE2Q9UKZ9 415 aa8.14□□□□□ -1.11
NR1I3-224ENST00000507215 PIEZO1Q92508 2521 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ZNF521Q96K83 1311 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 SRGAP3O43295 1099 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ANP32CO43423 234 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 CNMDO75829 334 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 GH2P01242 217 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ADORA2AP29274 412 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 CYP2C19P33261 490 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 COG2Q14746 738 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 LRRC41Q15345 812 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 CCDC158Q5M9N0 1113 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ANKRD33Q7Z3H0 272 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 MSL3Q8N5Y2 521 aaKnown RBP8.13□□□□□ -1.11
NR1I3-224ENST00000507215 TIFAQ96CG3 184 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 EAF1Q96JC9 268 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ZNF512BQ96KM6 892 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-224ENST00000507215 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 SH2D4AQ9H788 454 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 DNAJC18Q9H819 358 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 SMC4Q9NTJ3 1288 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 UBP1Q9NZI7 540 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 FLRT1Q9NZU1 646 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 DDX41Q9UJV9 622 aaKnown RBP8.13□□□□□ -1.11
NR1I3-224ENST00000507215 DIS3Q9Y2L1 958 aaKnown RBP8.13□□□□□ -1.11
NR1I3-224ENST00000507215 SIPA1L1O43166 1804 aa8.13□□□□□ -1.11
NR1I3-224ENST00000507215 TRIM43BA6NCK2 446 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 PRR19A6NJB7 356 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 WDR64B1ANS9 1081 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 LEFTY1O75610 366 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 SLC25A27O95847 323 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 FCER1AP12319 257 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 TLE2Q04725 743 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 RAD51AP2Q09MP3 1159 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 TFCP2Q12800 502 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 SLBPQ14493 270 aaKnown RBP eCLIP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 RAB30Q15771 203 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 ABCB5Q2M3G0 1257 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 CERKLQ49MI3 558 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 NT5DC4Q86YG4 428 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 MAPKAPK5Q8IW41 473 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 TRPV1Q8NER1 839 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 NPLOC4Q8TAT6 608 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 TRIM43Q96BQ3 446 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 TBC1D32Q96NH3 1257 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 SEZ6LQ9BYH1 1024 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 SPATC1LQ9H0A9 340 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 SSU72Q9NP77 194 aaKnown RBP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
NR1I3-224ENST00000507215 PA2G4Q9UQ80 394 aaKnown RBP8.12□□□□□ -1.11
NR1I3-224ENST00000507215 MYO9BQ13459 2157 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 TIMP1P01033 207 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 TGFB1P01137 390 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 AKR1A1P14550 325 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 MCAMP43121 646 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 G3BP1Q13283 466 aaKnown RBP eCLIP8.11□□□□□ -1.11
NR1I3-224ENST00000507215 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-224ENST00000507215 REC114Q7Z4M0 266 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 SLC44A5Q8NCS7 719 aa8.11□□□□□ -1.11
NR1I3-224ENST00000507215 ARHGAP45Q92619 1136 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms