RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MTF2Q9Y483 593 aaPredicted RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 TELO2Q9Y4R8 837 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 KIAA1217Q5T5P2 1943 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 ASXL3Q9C0F0 2248 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 NT5C1B-RDH14C9J2C7 533 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 M0R2C6 588 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 RNF113AO15541 343 aaKnown RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 DHX16O60231 1041 aaKnown RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 MGEA5O60502 916 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 N4BP1O75113 896 aaKnown RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 RETP07949 1114 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 PDHBP11177 359 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 NEDD9Q14511 834 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 RRP12Q5JTH9 1297 aaKnown RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 CEP85Q6P2H3 762 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 LRRC55Q6ZSA7 311 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 VPS52Q8N1B4 723 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 SLC22A17Q8WUG5 538 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 APPBP2Q92624 585 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 MYL10Q9BUA6 226 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 CELF4Q9BZC1 486 aaKnown RBP8.38□□□□□ -1.07
VCAN-207ENST00000507162 MAF1Q9H063 256 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 PCDHA1Q9Y5I3 950 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 SQORQ9Y6N5 450 aa8.38□□□□□ -1.07
VCAN-207ENST00000507162 KANSL1LA0AUZ9 987 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 TAF4O00268 1085 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 MYBP10242 640 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 SPINK2P20155 84 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 CD72P21854 359 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 CCND2P30279 289 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 HOXA13P31271 388 aaPredicted RBP8.37□□□□□ -1.07
VCAN-207ENST00000507162 METAP2P50579 478 aaKnown RBP eCLIP8.37□□□□□ -1.07
VCAN-207ENST00000507162 STARD6P59095 220 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 GPC5P78333 572 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 PGM5Q15124 567 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 AASDHQ4L235 1098 aaPredicted RBP8.37□□□□□ -1.07
VCAN-207ENST00000507162 LAIR1Q6GTX8 287 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 METTL7BQ6UX53 244 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 SLC24A5Q71RS6 500 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 ITPRIPQ8IWB1 547 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 TRMT2AQ8IZ69 625 aaKnown RBP8.37□□□□□ -1.07
VCAN-207ENST00000507162 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 BBXQ8WY36 941 aaPredicted RBP8.37□□□□□ -1.07
VCAN-207ENST00000507162 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 MYADMQ96S97 322 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 SFXN1Q9H9B4 322 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 RGS18Q9NS28 235 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
VCAN-207ENST00000507162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
VCAN-207ENST00000507162 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 MBLAC1A4D2B0 266 aaPredicted RBP8.36□□□□□ -1.07
VCAN-207ENST00000507162 C9IYK1 514 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 KLRC2P26717 231 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 NOVP48745 357 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
VCAN-207ENST00000507162 KRT76Q01546 638 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 FOXC1Q12948 553 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 CSRP2Q16527 193 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 QRICH1Q2TAL8 776 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 MARCH8Q5T0T0 291 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 ADGRF4Q8IZF3 695 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 SLC39A11Q8N1S5 342 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 CELF5Q8N6W0 485 aaKnown RBP8.36□□□□□ -1.07
VCAN-207ENST00000507162 RNF169Q8NCN4 708 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 STAMQ92783 540 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 TMEM169Q96HH4 297 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 CASD1Q96PB1 797 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 TMEM117Q9H0C3 514 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
VCAN-207ENST00000507162 ITPR1Q14643 2758 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 CCDC195A0A1B0GUA6 201 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 ANP32CO43423 234 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 LRP3O75074 770 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 KCNK5O95279 499 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 INSRRP14616 1297 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 TCF7P36402 384 aaPredicted RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 ALDH7A1P49419 539 aaKnown RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 HSD17B4P51659 736 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 SLC44A4Q53GD3 710 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 ZBTB41Q5SVQ8 909 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 ZKSCAN2Q63HK3 967 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 STOX1Q6ZVD7 989 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 PPFIBP1Q86W92 1011 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 NELL1Q92832 810 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 SEC62Q99442 399 aaKnown RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 SLC2A4RGQ9NR83 387 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms