RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 MCF2L2Q86YR7 1114 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 FBXO16Q8IX29 292 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 DIS3LQ8TF46 1054 aaKnown RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 PHKBQ93100 1093 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 C22orf23Q9BZE7 217 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 DDX20Q9UHI6 824 aaKnown RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 SYNGAP1Q96PV0 1343 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 ASB14A6NK59 587 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 SEPT4O43236 478 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
CLCN3-205ENST00000506924 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 TMEM63BQ5T3F8 832 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 ZNF385CQ66K41 422 aaPredicted RBP10.9□□□□□ -0.66
CLCN3-205ENST00000506924 FBXL16Q8N461 479 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 GALNT6Q8NCL4 622 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 FRRS1LQ9P0K9 344 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 CNTN3Q9P232 1028 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 ADD3Q9UEY8 706 aaKnown RBP10.9□□□□□ -0.66
CLCN3-205ENST00000506924 TPCN1Q9ULQ1 816 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 SLC6A14Q9UN76 642 aa10.9□□□□□ -0.66
CLCN3-205ENST00000506924 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 GCOM1H8Y6P7 765 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 ADCY6O43306 1168 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 CPNE3O75131 537 aaKnown RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 PGK1P00558 417 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 POLR2MP0CAP2 368 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 CES1P23141 567 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 ADCYAP1R1P41586 468 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 RGS19P49795 217 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 HSD17B4P51659 736 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 CCDC144BQ3MJ40 725 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 GJC2Q5T442 439 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 USP17L6PQ6QN14 398 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 ZSCAN1Q8NBB4 408 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 PAWRQ96IZ0 340 aaKnown RBP10.89□□□□□ -0.67
CLCN3-205ENST00000506924 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 SLC26A6Q9BXS9 759 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 KATNBL1Q9H079 304 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 OGDHLQ9ULD0 1010 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CLCN3-205ENST00000506924 FRMPD3Q5JV73 1810 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 ANKRD33BA6NCL7 494 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 ZBTB42B2RXF5 422 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 LARGE1O95461 756 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 RARBP10826 455 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 MYCLP12524 364 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-205ENST00000506924 AKR1A1P14550 325 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 RCAN1P53805 252 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 NAPAP54920 295 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 EVCP57679 992 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 TRAF1Q13077 416 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 UBE2SQ16763 222 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 C1orf229Q6ZS94 237 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-205ENST00000506924 SVOPQ8N4V2 548 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 NECAB1Q8N987 351 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 TTC9Q92623 222 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 ZNF274Q96GC6 653 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-205ENST00000506924 KIF2CQ99661 725 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 XPNPEP3Q9NQH7 507 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 SALL4Q9UJQ4 1053 aa10.88□□□□□ -0.67
CLCN3-205ENST00000506924 FOXD3Q9UJU5 478 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-205ENST00000506924 STXBP3O00186 592 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 CPLX1O14810 134 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 MSCO60682 206 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 EDN3P14138 238 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 AKAP17AQ02040 695 aaKnown RBP10.87□□□□□ -0.67
CLCN3-205ENST00000506924 SCRN1Q12765 414 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 NTRK3Q16288 839 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 PKN1Q16512 942 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 DNERQ8NFT8 737 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 SMARCC2Q8TAQ2 1214 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 MORC4Q8TE76 937 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
CLCN3-205ENST00000506924 IL17RAQ96F46 866 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 RBSNQ9H1K0 784 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
CLCN3-205ENST00000506924 PSTPIP2Q9H939 334 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 PXMP2Q9NR77 195 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 NRBP1Q9UHY1 535 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 NID2Q14112 1375 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 LRRC37A2A6NM11 1700 aa10.87□□□□□ -0.67
CLCN3-205ENST00000506924 MKI67P46013 3256 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 MYADML2A6NDP7 307 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 EIF1AYO14602 144 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 MEIS2O14770 477 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms