RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 BIN2Q9UBW5 565 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 DIS3Q9Y2L1 958 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 RPTORQ8N122 1335 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 GOLGA6L10A0A0M3HER8 536 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 EDIL3O43854 480 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 CDC25CP30307 473 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 ADAM9Q13443 819 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 SLC4A8Q2Y0W8 1093 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 BTNL9Q6UXG8 535 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 ERICH1Q86X53 443 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 NELFCDQ8IXH7 590 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 SPICE1Q8N0Z3 855 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 MICAL1Q8TDZ2 1067 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 MTMR7Q9Y216 660 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 BCL9O00512 1426 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 KIAA0391O15091 583 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 DDX3YO15523 660 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 IFNAR2P48551 515 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 PLTPP55058 493 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 FBXO25Q8TCJ0 367 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 SCFD1Q8WVM8 642 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 DHX34Q14147 1143 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 KIAA1755Q5JYT7 1200 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 SOGA3Q5TF21 947 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 ASRGL1Q7L266 308 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 KLHL29Q96CT2 875 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 ERVK-5Q9HDB9 667 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 TMEM260Q9NX78 707 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 TBC1D7Q9P0N9 293 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 CD2APQ9Y5K6 639 aa18.53■□□□□ 0.56
SQSTM1-211ENST00000506690 ESYT2A0FGR8 921 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 KLHL33A6NCF5 533 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 ANKRD33BA6NCL7 494 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 A6NHS1 94 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 SMIM23A6NLE4 172 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 A8MUI8 341 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 DDX3XO00571 662 aaKnown RBP eCLIP18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 TDP2O95551 362 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 PON1P27169 355 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 PEX19P40855 299 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 BIRC2Q13490 618 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 DDB1Q16531 1140 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 ANKRD20A2Q5SQ80 823 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 ANKRD20A1Q5TYW2 823 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 ANKRD20A3Q5VUR7 823 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 TBC1D16Q8TBP0 767 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 GLG1Q92896 1179 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 CARD9Q9H257 536 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 GGT7Q9UJ14 662 aa18.52■□□□□ 0.56
SQSTM1-211ENST00000506690 UBAP1LF5GYI3 381 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 TSPY3P0CV98 308 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 TSPY8P0CW00 308 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 MSH2P43246 934 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 JAM2P57087 298 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 VPS36Q86VN1 386 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 JAMLQ86YT9 394 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 NAP1L3Q99457 506 aaPredicted RBP18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 STMN4Q9H169 189 aaPredicted RBP18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 SEMA4AQ9H3S1 761 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 GRHL1Q9NZI5 618 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 SNX24Q9Y343 169 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.55
SQSTM1-211ENST00000506690 CETN3O15182 167 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 ATP2A2P16615 1042 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 ABL2P42684 1182 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 MAPK7Q13164 816 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 UBAP2Q5T6F2 1119 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 EPS8L3Q8TE67 593 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 IFT74Q96LB3 600 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 ANKRD27Q96NW4 1050 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 SUN1O94901 812 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 LUC7L3O95232 432 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 GJB6O95452 261 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 NTSR2O95665 410 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 BRD2P25440 801 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 COPB2P35606 906 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 GALCP54803 685 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 PPATQ06203 517 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 AUHQ13825 339 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 EXOC3L4Q17RC7 722 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 PARP10Q53GL7 1025 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 TAOK1Q7L7X3 1001 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 KIF2BQ8N4N8 673 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 CDCA7Q9BWT1 371 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 OSGEPQ9NPF4 335 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 EMILIN3Q9NT22 766 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 MAST2Q6P0Q8 1798 aa18.51■□□□□ 0.55
SQSTM1-211ENST00000506690 O00370 1275 aa18.5■□□□□ 0.55
SQSTM1-211ENST00000506690 NCANO14594 1321 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms