RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 NCAPH2Q6IBW4 605 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 FAM178BQ8IXR5 827 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 FAM49AQ9H0Q0 323 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-209ENST00000506630 VAV3Q9UKW4 847 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 LINC01553A4QN01 128 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-209ENST00000506630 EML1O00423 815 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 CXCL10P02778 98 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 OATP04181 439 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 ALADP13716 330 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 KCNA5P22460 613 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 ZNF484Q5JVG2 852 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 TTC38Q5R3I4 469 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 RSPH3Q86UC2 560 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
TCOF1-209ENST00000506630 BANK1Q8NDB2 785 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 DNAJB3Q8WWF6 145 aa14.73□□□□□ -0.05
TCOF1-209ENST00000506630 TRANK1O15050 2925 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 ZNF862O60290 1169 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 U2AF2P26368 475 aaKnown RBP eCLIP14.72□□□□□ -0.05
TCOF1-209ENST00000506630 KLRC1P26715 233 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 ZNF174Q15697 407 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 PUS10Q3MIT2 529 aaKnown RBP14.72□□□□□ -0.05
TCOF1-209ENST00000506630 LARP1BQ659C4 914 aaKnown RBP14.72□□□□□ -0.05
TCOF1-209ENST00000506630 FAM117BQ6P1L5 589 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 MTHFD1LQ6UB35 978 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 TMEM60Q9H2L4 133 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 SEPT9Q9UHD8 586 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-209ENST00000506630 CEP131Q9UPN4 1083 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 INSL6Q9Y581 213 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 PCDHA2Q9Y5H9 948 aa14.72□□□□□ -0.05
TCOF1-209ENST00000506630 ZBTB42B2RXF5 422 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 TXKP42681 527 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 TRAPPC10P48553 1259 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 TMEM62Q0P6H9 643 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 ORC2Q13416 577 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-209ENST00000506630 NBR1Q14596 966 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 PTCRAQ6ISU1 281 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-209ENST00000506630 RPAINQ86UA6 219 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 FBXO22Q8NEZ5 403 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-209ENST00000506630 TTC12Q9H892 705 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-209ENST00000506630 NRBP2Q9NSY0 501 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 PCDHA12Q9UN75 941 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 CDY2AQ9Y6F7 541 aa14.71□□□□□ -0.05
TCOF1-209ENST00000506630 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 M0QZ92 97 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 C22orf31O95567 290 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 RPLP2P05387 115 aaKnown RBP14.7□□□□□ -0.06
TCOF1-209ENST00000506630 OR52Z1P0C646 297 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 QARSP47897 775 aaKnown RBP14.7□□□□□ -0.06
TCOF1-209ENST00000506630 PSMC5P62195 406 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 MRPS6P82932 125 aaKnown RBP14.7□□□□□ -0.06
TCOF1-209ENST00000506630 SPIRE1Q08AE8 756 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 MGAT3Q09327 533 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 EPHA7Q15375 998 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 PTPROQ16827 1216 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 MTERF2Q49AM1 385 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.7□□□□□ -0.06
TCOF1-209ENST00000506630 METTL13Q8N6R0 699 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 SNX21Q969T3 373 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 DYDC2Q96IM9 177 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 MTMR9Q96QG7 549 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 LXNQ9BS40 222 aa14.7□□□□□ -0.06
TCOF1-209ENST00000506630 VPS37CA5D8V6 355 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-209ENST00000506630 TMEM150BA6NC51 233 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 GRXCR2A6NFK2 248 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 POTEMA6NI47 508 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 DKC1O60832 514 aaKnown RBP eCLIP14.69□□□□□ -0.06
TCOF1-209ENST00000506630 CHRNA1P02708 482 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 AMHP03971 560 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 P4HBP07237 508 aaKnown RBP14.69□□□□□ -0.06
TCOF1-209ENST00000506630 GHRP10912 638 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 IL9P15248 144 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 CYP4A11Q02928 519 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 XKR3Q5GH77 459 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 FAM26DQ5JW98 314 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 IER5Q5VY09 327 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 MRPL38Q96DV4 380 aaKnown RBP14.69□□□□□ -0.06
TCOF1-209ENST00000506630 SH2D3AQ9BRG2 576 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 FAM50BQ9Y247 325 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 PCDHB6Q9Y5E3 794 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
TCOF1-209ENST00000506630 PIEZO1Q92508 2521 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 NLRC5Q86WI3 1866 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 DDX11L8A8MPP1 907 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 MAGEB2O15479 319 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 PDCP20941 246 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 TOB1P50616 345 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 CLCN3P51790 818 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 CTTNQ14247 550 aaKnown RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 TMEM266Q2M3C6 531 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 TIGD5Q53EQ6 642 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms