RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PIK3AP1Q6ZUJ8 805 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 FBXO22Q8NEZ5 403 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 HAS1Q92839 578 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 OSMRQ99650 979 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 KCNMB3Q9NPA1 279 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 WRAP73Q9P2S5 460 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 DDX25Q9UHL0 483 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 VAV3Q9UKW4 847 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
PDLIM7-215ENST00000506161 FAM86C2PA6NEL3 165 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 CDKL5O76039 1030 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 TARBP2Q15633 366 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 GALNT17Q6IS24 598 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 MIER3Q7Z3K6 550 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 BANK1Q8NDB2 785 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 HCSTQ9UBK5 93 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
PDLIM7-215ENST00000506161 DGKIO75912 1065 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 PAK2Q13177 524 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 ANKRD1Q15327 319 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 NEK8Q86SG6 692 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 TMEM192Q8IY95 271 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 NME8Q8N427 588 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 METTL13Q8N6R0 699 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 ADAMTS10Q9H324 1103 aa18.87■□□□□ 0.61
PDLIM7-215ENST00000506161 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 M0QZ92 97 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 IBSPP21815 317 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 JAK3P52333 1124 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 NFX1Q12986 1120 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 EFCAB12Q6NXP0 572 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 FAM177A1Q8N128 213 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 ZNF579Q8NAF0 562 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 HLA-CQ95604 372 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 MRPL42Q9Y6G3 142 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 PIEZO1Q92508 2521 aa18.86■□□□□ 0.61
PDLIM7-215ENST00000506161 BTBD18B2RXH4 712 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 H3BNC9 293 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 RPS6KA5O75582 802 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 FGFR4P22455 802 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 SFNP31947 248 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 GPM6BQ13491 265 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 DSC3Q14574 896 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 MTERF2Q49AM1 385 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 PAN2Q504Q3 1202 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 PLA2G4FQ68DD2 849 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 TCEAL9Q9UHQ7 104 aa18.85■□□□□ 0.61
PDLIM7-215ENST00000506161 PI4K2BG5E9Z4 385 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 GRM6O15303 877 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 CCNT1O60563 726 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 CSDE1O75534 798 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 ANO5Q75V66 913 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 CCDC83Q8IWF9 413 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 FIBCD1Q8N539 461 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 SEPT9Q9UHD8 586 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-215ENST00000506161 C9IYK1 514 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 ZBTB39O15060 712 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 CSPG5O95196 566 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 MMP1P03956 469 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 CTNNB1P35222 781 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 KRT2P35908 639 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 CRYBB1P53674 252 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 NPEPPSP55786 919 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 GUCY1B3Q02153 619 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 CAMK1Q14012 370 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 NPAS4Q8IUM7 802 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 RDM1Q8NG50 284 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 CLP1Q92989 425 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 ADAM2Q99965 735 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 NIFKQ9BYG3 293 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 RNF19AQ9NV58 838 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 RGL1Q9NZL6 768 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 AKT3Q9Y243 479 aa18.83■□□□□ 0.6
PDLIM7-215ENST00000506161 IGKV6-21A0A0C4DH24 114 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 DNAJB1P25685 340 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 BMPR1AP36894 532 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 GPC3P51654 580 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 FAM102BQ5T8I3 360 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 RGS18Q9NS28 235 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 NRBP2Q9NSY0 501 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 LMCD1Q9NZU5 365 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 MUC6Q6W4X9 2439 aa18.82■□□□□ 0.6
PDLIM7-215ENST00000506161 PRR33A8MZF0 331 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms