RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 DMAC2Q9NW81 257 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 PCDHA13Q9Y5I0 950 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 A0A0G2JMZ2 1700 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 HIP1RO75146 1068 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 KRT13P13646 458 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 EIF4A3P38919 411 aaKnown RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 RARRES1P49788 294 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SMTNP53814 917 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 RTP1P59025 263 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SLC30A10Q6XR72 485 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 INTS8Q75QN2 995 aaKnown RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 RUBCNQ92622 972 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 KIFAP3Q92845 792 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SPAG5Q96R06 1193 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 MOV10L1Q9BXT6 1211 aaKnown RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 JRKLQ9Y4A0 524 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 PCDHA10Q9Y5I2 948 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 CSADQ9Y600 493 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SBF1O95248 1867 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 BTNL10A8MVZ5 291 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 RSPH10B2B2RC85 870 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 NR3C2P08235 984 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 RSPH10BP0C881 870 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 ITGB3BPQ13352 177 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 BRD3Q15059 726 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 ARHGAP20Q9P2F6 1191 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-205ENST00000505458 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
NFKB1-205ENST00000505458 ERLIN1O75477 346 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 PSAPP07602 524 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 NF2P35240 595 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 HOXD13P35453 343 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 PRKCIP41743 596 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 MAGEA1P43355 309 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 HMGCS2P54868 508 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 ERCC6LQ2NKX8 1250 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 TSC1Q92574 1164 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 OGFRQ9NZT2 677 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 PMM2O15305 246 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 TGFB1I1O43294 461 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 FERP16591 822 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 CCDC70Q6NSX1 233 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 TMCO3Q6UWJ1 677 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 BANK1Q8NDB2 785 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 DCPSQ96C86 337 aaKnown RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 K7ENM7 598 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 AMPD2Q01433 879 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 ITIH3Q06033 890 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 BAATQ14032 418 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 ASTE1Q2TB18 679 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-205ENST00000505458 TRAPPC11Q7Z392 1133 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 KCNN1Q92952 543 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 NOX5Q96PH1 765 aa12.4□□□□□ -0.42
NFKB1-205ENST00000505458 FANCGO15287 622 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 AKAP3O75969 853 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 NOL4O94818 638 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
NFKB1-205ENST00000505458 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 MAPK7Q13164 816 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 SULF1Q8IWU6 871 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 ICAM3P32942 547 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
NFKB1-205ENST00000505458 TCERG1LQ5VWI1 586 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.39□□□□□ -0.43
NFKB1-205ENST00000505458 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-205ENST00000505458 BORCS6Q96GS4 357 aa12.39□□□□□ -0.43
NFKB1-205ENST00000505458 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-205ENST00000505458 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms