RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 HOXA2O43364 376 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 ATG7O95352 703 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 SMARCA1P28370 1054 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 CRYBB1P53674 252 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 FAM228AQ86W67 206 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 OSMRQ99650 979 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 RTP3Q9BQQ7 232 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 MYL10Q9BUA6 226 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 IL25Q9H293 177 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 USTQ9Y2C2 406 aa13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-219ENST00000505392 NT5C1B-RDH14C9J2C7 533 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 STK25O00506 426 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 EOMESO95936 686 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 LMNAP02545 664 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 CYP21A2P08686 494 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 KIF5BP33176 963 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 SLC26A2P50443 739 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 DSC3Q14574 896 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 KIAA2013Q8IYS2 634 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 NCOA7Q8NI08 942 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
CCHCR1-219ENST00000505392 CACNA1AO00555 2505 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 NFASCO94856 1347 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 BACH1O14867 736 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 GPR32O75388 356 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 VTNP04004 478 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 TDGQ13569 410 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 TMC5Q6UXY8 1006 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 METTL13Q8N6R0 699 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 FBXL21Q9UKT6 434 aa13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-219ENST00000505392 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 E7EWF7 191 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 EPCAMP16422 314 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 GNAQP50148 359 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 PDXDC2PQ6P474 469 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 SIX5Q8N196 739 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 KCNK12Q9HB15 430 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 DZANK1Q9NVP4 752 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
CCHCR1-219ENST00000505392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 ZBTB42B2RXF5 422 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 DDX39AO00148 427 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 CCNE2O96020 404 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 ATP4AP20648 1035 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 BCAR1P56945 870 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 PTH1RQ03431 593 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 FAM160B1Q5W0V3 765 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 OTOP3Q7RTS5 596 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 CABP7Q86V35 215 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 TMEM169Q96HH4 297 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 ZNF302Q9NR11 478 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
CCHCR1-219ENST00000505392 R4GN57 208 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms