RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 IFFO1Q0D2I5 559 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 DYNC1I2Q13409 638 aaKnown RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 PRPF4BQ13523 1007 aaKnown RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 NAA25Q14CX7 972 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 PLCB4Q15147 1175 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 SLC4A8Q2Y0W8 1093 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 KBTBD12Q3ZCT8 623 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 SLC30A9Q6PML9 568 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 HDXQ7Z353 690 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 POU5F2Q8N7G0 328 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 FAM71BQ8TC56 605 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 LPIN2Q92539 896 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 ZKSCAN4Q969J2 545 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 SLX1AQ9BQ83 275 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 GBP3Q9H0R5 595 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 CCDC86Q9H6F5 360 aaKnown RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 ATP6V0A4Q9HBG4 840 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 KRT82Q9NSB4 513 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 STK32BQ9NY57 414 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 AP4E1Q9UPM8 1137 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 COL1A1P02452 1464 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 MED23Q9ULK4 1368 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 MYO5AQ9Y4I1 1855 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 DUOX1Q9NRD9 1551 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 A0A0D9SFI3 127 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 LIN7AO14910 233 aaPredicted RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 NPHP1O15259 732 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ZNF862O60290 1169 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 CHGBP05060 677 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 MMP10P09238 476 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 IFIT1P09914 478 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 FAM200BP0CF97 657 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 CCDC192P0DO97 292 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 FERP16591 822 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 MCAMP43121 646 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 RPS8P62241 208 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ROR2Q01974 943 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 NMIQ13287 307 aaPredicted RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 KIAA0753Q2KHM9 967 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 TSNAXIP1Q2TAA8 658 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 OGFOD2Q6N063 350 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 CPLX2Q6PUV4 134 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 APBB1IPQ7Z5R6 666 aaPredicted RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ZFAND2BQ8WV99 257 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 SPDL1Q96EA4 605 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 HOOK2Q96ED9 719 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ZNF512BQ96KM6 892 aaPredicted RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 FAM227BQ96M60 508 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ALS2CR12Q96Q35 445 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 TRIM4Q9C037 500 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 PDGFDQ9GZP0 370 aaPredicted RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 LUC7LQ9NQ29 371 aaKnown RBP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 PAG1Q9NWQ8 432 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 SPATA7Q9P0W8 599 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.52□□□□□ -1.21
SSBP2-204ENST00000504985 DLEC1Q9Y238 1755 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 CACNA1SQ13698 1873 aa7.52□□□□□ -1.21
SSBP2-204ENST00000504985 ZNF804BA4D1E1 1349 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 IRS2Q9Y4H2 1338 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 GOLGA6L7A0A1B0GV03 622 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 ERICH2A1L162 156 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 F8VZ95 297 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 SLC5A1P13866 664 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 FLT3P36888 993 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 RANBP1P43487 201 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 CCDC15Q0P6D6 951 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 IFT88Q13099 833 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 GRAPQ13588 217 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 GRM2Q14416 872 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 POSTNQ15063 836 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 ERCC6LQ2NKX8 1250 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 CWF19L1Q69YN2 538 aaKnown RBP7.51□□□□□ -1.21
SSBP2-204ENST00000504985 ZSCAN25Q6NSZ9 544 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 CC2D1AQ6P1N0 951 aaPredicted RBP7.51□□□□□ -1.21
SSBP2-204ENST00000504985 CWC27Q6UX04 472 aaKnown RBP7.51□□□□□ -1.21
SSBP2-204ENST00000504985 SPRED2Q7Z698 418 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 LUZP1Q86V48 1076 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 ANKRD13BQ86YJ7 626 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 CCDC65Q8IXS2 484 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 FLCNQ8NFG4 579 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 B4GALNT2Q8NHY0 566 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 GRAPLQ8TC17 118 aaPredicted RBP7.51□□□□□ -1.21
SSBP2-204ENST00000504985 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
SSBP2-204ENST00000504985 PPP1R14BQ96C90 147 aa7.51□□□□□ -1.21
SSBP2-204ENST00000504985 ASIC4Q96FT7 647 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms