RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 YEATS4O95619 227 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 PABPC1P11940 636 aaKnown RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 RFC4P35249 363 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ZNF143P52747 638 aaPredicted RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 RBM6P78332 1123 aaKnown RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 KIF23Q02241 960 aaPredicted RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 PPARAQ07869 468 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 BIRC2Q13490 618 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ZNF460Q14592 562 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNX25-203ENST00000504959 SAFBQ15424 915 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNX25-203ENST00000504959 STX1AQ16623 288 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 KIF4BQ2VIQ3 1234 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 RBM43Q6ZSC3 357 aaKnown RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 SMIM5Q71RC9 77 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 LUZP1Q86V48 1076 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 PHACTR4Q8IZ21 702 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ZNF513Q8N8E2 541 aaPredicted RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 LINC00301Q8NCQ3 95 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 SDR42E1Q8WUS8 393 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 PIBF1Q8WXW3 757 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ESR2Q92731 530 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 SDF4Q9BRK5 362 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 SLC26A6Q9BXS9 759 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 WNT10AQ9GZT5 417 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 GOLPH3LQ9H4A5 285 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ZIM2Q9NZV7 527 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 RGS17Q9UGC6 210 aaPredicted RBP6.45□□□□□ -1.38
SNX25-203ENST00000504959 SFMBT1Q9UHJ3 866 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 CLIC4Q9Y696 253 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 CACNA1SQ13698 1873 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 ZNF804BA4D1E1 1349 aa6.45□□□□□ -1.38
SNX25-203ENST00000504959 LAMB1P07942 1786 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 A0A1B0GVL5 298 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 A0A1W2PQ27 194 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 A0A1W2PQ64 194 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 A0A1W2PQD8 194 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 BECN2A8MW95 431 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 FSCN2O14926 492 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 PRODHO43272 600 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 AKAP10O43572 662 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 DLGAP3O95886 979 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 CAPNS1P04632 268 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 C6orf222P0C671 652 aaPredicted RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 NEK2P51955 445 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 NOLC1Q14978 699 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNX25-203ENST00000504959 SEPT7Q16181 437 aaKnown RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 DNTTIP2Q5QJE6 756 aaKnown RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 ANO1Q5XXA6 986 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 KRT40Q6A162 431 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 PTF1AQ7RTS3 328 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 FGD2Q7Z6J4 655 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 C14orf80Q86SX3 495 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 MCATQ8IVS2 390 aaKnown RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 SPC24Q8NBT2 197 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 NUP133Q8WUM0 1156 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 TTC9Q92623 222 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 RELTQ969Z4 430 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 MTMR8Q96EF0 704 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 FAM84BQ96KN1 310 aaPredicted RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 MTA3Q9BTC8 594 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 TRIM5Q9C035 493 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 NAT10Q9H0A0 1025 aaKnown RBP6.44□□□□□ -1.38
SNX25-203ENST00000504959 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 MAST2Q6P0Q8 1798 aa6.44□□□□□ -1.38
SNX25-203ENST00000504959 THSD7AQ9UPZ6 1657 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 KIF28PB7ZC32 967 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 TM4SF5O14894 197 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 FGFR1P11362 822 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 RXRBP28702 533 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 NTF4P34130 210 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 ARL4DP49703 201 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 NLRP12P59046 1061 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 DYNLL1P63167 89 aaKnown RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 AKAP17AQ02040 695 aaKnown RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 CHAF1AQ13111 956 aaPredicted RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 SNW1Q13573 536 aaKnown RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 HEATR6Q6AI08 1181 aaKnown RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 CCSAPQ6IQ19 270 aaPredicted RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 NSMFQ6X4W1 530 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 ADGRA1Q86SQ6 560 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 MYRIPQ8NFW9 859 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 ZNF830Q96NB3 372 aaPredicted RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 AIFM3Q96NN9 605 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 APBA2Q99767 749 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 WDR18Q9BV38 432 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 TRIM8Q9BZR9 551 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 KLHL25Q9H0H3 589 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
SNX25-203ENST00000504959 AVENQ9NQS1 362 aaPredicted RBP6.43□□□□□ -1.38
SNX25-203ENST00000504959 SPTLC3Q9NUV7 552 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms