RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GREB1Q4ZG55 1949 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 MYH9P35579 1960 aaKnown RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 WDR81Q562E7 1941 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 C9IYK1 514 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 FIBPO43427 364 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 N4BP1O75113 896 aaKnown RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 RPLP2P05387 115 aaKnown RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 SPEM2Q0P670 501 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 NONOQ15233 471 aaKnown RBP eCLIP14.49□□□□□ -0.09
LSM6-204ENST00000504181 VPS53Q5VIR6 699 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 SLC24A5Q71RS6 500 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 SLC44A3Q8N4M1 653 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 NETO1Q8TDF5 533 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 PANK1Q8TE04 598 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 BORCS6Q96GS4 357 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 INPP4AQ96PE3 977 aaPredicted RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 AMNQ9BXJ7 453 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 SFXN1Q9H9B4 322 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 MAP3K20Q9NYL2 800 aaKnown RBP14.49□□□□□ -0.09
LSM6-204ENST00000504181 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 GMEB2Q9UKD1 530 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 WDFY3Q8IZQ1 3526 aa14.49□□□□□ -0.09
LSM6-204ENST00000504181 DSPP15924 2871 aaKnown RBP14.48□□□□□ -0.09
LSM6-204ENST00000504181 IGF2RP11717 2491 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 GBP2P32456 591 aaPredicted RBP14.48□□□□□ -0.09
LSM6-204ENST00000504181 KRT76Q01546 638 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 LETM2Q2VYF4 491 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 DCLRE1AQ6PJP8 1040 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 PNMA1Q8ND90 353 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 SLC22A17Q8WUG5 538 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 GLG1Q92896 1179 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 CASD1Q96PB1 797 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 TMEM117Q9H0C3 514 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 TMEM161AQ9NX61 479 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 FBXO4Q9UKT5 387 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 GINS2Q9Y248 185 aa14.48□□□□□ -0.09
LSM6-204ENST00000504181 NOC2LQ9Y3T9 749 aaKnown RBP14.48□□□□□ -0.09
LSM6-204ENST00000504181 KDM3AQ9Y4C1 1321 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 NT5C1B-RDH14C9J2C7 533 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 PPP1R11O60927 126 aaPredicted RBP14.47□□□□□ -0.09
LSM6-204ENST00000504181 RPS6KA5O75582 802 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 PROS1P07225 676 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 INSRRP14616 1297 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 PMLP29590 882 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 METAP2P50579 478 aaKnown RBP eCLIP14.47□□□□□ -0.09
LSM6-204ENST00000504181 PTPN14Q15678 1187 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 SLC39A11Q8N1S5 342 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 LRRC43Q8N309 656 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 ZBTB44Q8NCP5 570 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 TRAPPC12Q8WVT3 735 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 GPATCH3Q96I76 525 aa14.47□□□□□ -0.09
LSM6-204ENST00000504181 RRN3P2A6NIE6 340 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 SOBPA7XYQ1 873 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 BMS1Q14692 1282 aaKnown RBP14.46□□□□□ -0.09
LSM6-204ENST00000504181 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 VPS52Q8N1B4 723 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 ZBP1Q9H171 429 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 CDHR5Q9HBB8 845 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 RNF19AQ9NV58 838 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 ZSCAN32Q9NX65 697 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 ZMIZ1Q9ULJ6 1067 aa14.46□□□□□ -0.09
LSM6-204ENST00000504181 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 GCOM1H8Y6P7 765 aaPredicted RBP14.45□□□□□ -0.1
LSM6-204ENST00000504181 TBC1D4O60343 1298 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 LILRB5O75023 590 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 STAM2O75886 525 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 POLR2MP0CAP2 368 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 HAND2P61296 217 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 LPAL2Q16609 132 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 N4BP2L1Q5TBK1 243 aaPredicted RBP14.45□□□□□ -0.1
LSM6-204ENST00000504181 ABI1Q8IZP0 508 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 MIER1Q8N108 512 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 TMEM40Q8WWA1 233 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 SENP7Q9BQF6 1050 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 BCO2Q9BYV7 579 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 ELAC1Q9H777 363 aaKnown RBP14.45□□□□□ -0.1
LSM6-204ENST00000504181 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 PCDHA2Q9Y5H9 948 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 AKAP13Q12802 2813 aa14.45□□□□□ -0.1
LSM6-204ENST00000504181 FRMPD4Q14CM0 1322 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 SHC2P98077 582 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 TSSK4Q6SA08 328 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 SAMD3Q8N6K7 520 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 ST13P5Q8NFI4 369 aaPredicted RBP14.44□□□□□ -0.1
LSM6-204ENST00000504181 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 TMEM169Q96HH4 297 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 MYADMQ96S97 322 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 SMARCAD1Q9H4L7 1026 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 KAT14Q9H8E8 782 aa14.44□□□□□ -0.1
LSM6-204ENST00000504181 ITPR1Q14643 2758 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 FLNBO75369 2602 aaKnown RBP14.43□□□□□ -0.1
LSM6-204ENST00000504181 HOXA2O43364 376 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 GDF9O60383 454 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 PARP1P09874 1014 aaKnown RBP14.43□□□□□ -0.1
LSM6-204ENST00000504181 STARD6P59095 220 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 FAM189BP81408 668 aa14.43□□□□□ -0.1
LSM6-204ENST00000504181 PLCB4Q15147 1175 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms