RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 QARSP47897 775 aaKnown RBP24.64■■□□□ 1.54
PCDH1-204ENST00000503492 ANKRD13CQ8N6S4 541 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 REPS2Q8NFH8 660 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 MMS19Q96T76 1030 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 GBP3Q9H0R5 595 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 SIX2Q9NPC8 291 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 DMAC2Q9NW81 257 aa24.64■■□□□ 1.54
PCDH1-204ENST00000503492 RARRES1P49788 294 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 HMGCS2P54868 508 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 KLHL30Q0D2K2 578 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 BAATQ14032 418 aaPredicted RBP24.64■■□□□ 1.53
PCDH1-204ENST00000503492 ARHGEF16Q5VV41 709 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 GBP6Q6ZN66 633 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 JRKLQ9Y4A0 524 aa24.64■■□□□ 1.53
PCDH1-204ENST00000503492 COL11A1P12107 1806 aaPredicted RBP24.63■■□□□ 1.53
PCDH1-204ENST00000503492 POTEB2H3BUK9 544 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 RHOXF2BP0C7M4 288 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 HS2ST1Q7LGA3 356 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 CAPZA3Q96KX2 299 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 RHOXF2Q9BQY4 288 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 MKNK1Q9BUB5 465 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 RAB21Q9UL25 225 aa24.63■■□□□ 1.53
PCDH1-204ENST00000503492 CCDC151A5D8V7 595 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 LYPLA2O95372 231 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 ENOX2Q16206 610 aaKnown RBP24.62■■□□□ 1.53
PCDH1-204ENST00000503492 SLC18A3Q16572 532 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 UGCGQ16739 394 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 IRF2BP2Q7Z5L9 587 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 NLGN2Q8NFZ4 835 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 C12orf42Q96LP6 360 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 MYH10P35580 1976 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 A0A087X0T9 212 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 ZNF185O15231 689 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 FAM228BP0C875 321 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 CYP2J2P51589 502 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 BRD3Q15059 726 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 ARFGAP3Q9NP61 516 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 GCNT4Q9P109 453 aa24.62■■□□□ 1.53
PCDH1-204ENST00000503492 AJAP1Q9UKB5 411 aaPredicted RBP24.62■■□□□ 1.53
PCDH1-204ENST00000503492 PHIPQ8WWQ0 1821 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 TBC1D8O95759 1140 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 PLS1Q14651 629 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 RBM46Q8TBY0 533 aaKnown RBP24.61■■□□□ 1.53
PCDH1-204ENST00000503492 SPAG5Q96R06 1193 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 SH2D3AQ9BRG2 576 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 TESPA1A2RU30 521 aaPredicted RBP24.61■■□□□ 1.53
PCDH1-204ENST00000503492 GTPBP10A4D1E9 387 aaKnown RBP24.61■■□□□ 1.53
PCDH1-204ENST00000503492 TMEM150BA6NC51 233 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 CCNE2O96020 404 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 YWHABP31946 246 aaKnown RBP24.61■■□□□ 1.53
PCDH1-204ENST00000503492 DSG3P32926 999 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 TXLNBQ8N3L3 684 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 DRC1Q96MC2 740 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.61■■□□□ 1.53
PCDH1-204ENST00000503492 ADAMTS1Q9UHI8 967 aa24.61■■□□□ 1.53
PCDH1-204ENST00000503492 K7ENM7 598 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 PPP1R12BO60237 982 aaPredicted RBP24.6■■□□□ 1.53
PCDH1-204ENST00000503492 SNRNP48Q6IEG0 339 aaKnown RBP24.6■■□□□ 1.53
PCDH1-204ENST00000503492 GGA3Q9NZ52 723 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 FBXL5Q9UKA1 691 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 SNX12Q9UMY4 172 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 ADAMTS5Q9UNA0 930 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 SASH3O75995 380 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 KLRG1Q96E93 195 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 ALS2CR12Q96Q35 445 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 GPRC5DQ9NZD1 345 aa24.6■■□□□ 1.53
PCDH1-204ENST00000503492 LARSQ9P2J5 1176 aaKnown RBP24.6■■□□□ 1.53
PCDH1-204ENST00000503492 ZNF214Q9UL59 606 aaPredicted RBP24.6■■□□□ 1.53
PCDH1-204ENST00000503492 PDE2AO00408 941 aaPredicted RBP24.59■■□□□ 1.53
PCDH1-204ENST00000503492 ATP8B1O43520 1251 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 PTK2Q05397 1052 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 GJB7Q6PEY0 223 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 C4orf19Q8IY42 314 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 SYCP3Q8IZU3 236 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 FRMD4BQ9Y2L6 1034 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 C19orf81C9J6K1 198 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 BUB1O43683 1085 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 PLA2G4AP47712 749 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 CKAP4Q07065 602 aaKnown RBP24.59■■□□□ 1.53
PCDH1-204ENST00000503492 ZNF571Q7Z3V5 609 aaPredicted RBP24.59■■□□□ 1.53
PCDH1-204ENST00000503492 VSIG10LQ86VR7 867 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 RNF10Q8N5U6 811 aaKnown RBP24.59■■□□□ 1.53
PCDH1-204ENST00000503492 GOLGA5Q8TBA6 731 aa24.59■■□□□ 1.53
PCDH1-204ENST00000503492 MAPTP10636 758 aaKnown RBP24.58■■□□□ 1.53
PCDH1-204ENST00000503492 FMO5P49326 533 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 JAK3P52333 1124 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 HIRAP54198 1017 aaPredicted RBP24.58■■□□□ 1.53
PCDH1-204ENST00000503492 JAM2P57087 298 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 SLC9A9Q8IVB4 645 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 FBXO41Q8TF61 875 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 NOX5Q96PH1 765 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 LUC7LQ9NQ29 371 aaKnown RBP24.58■■□□□ 1.53
PCDH1-204ENST00000503492 SSC5DA1L4H1 1573 aa24.58■■□□□ 1.53
PCDH1-204ENST00000503492 WDR64B1ANS9 1081 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 BACH1O14867 736 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 NR3C2P08235 984 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 PLS3P13797 630 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 CCND2P30279 289 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 OAZ1P54368 228 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 PSMC5P62195 406 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms