RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 SLC7A3Q8WY07 619 aa18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 HERVK_113Q902F9 699 aa18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 USP28Q96RU2 1077 aa18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 CELF4Q9BZC1 486 aaKnown RBP18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 MTIF3Q9H2K0 278 aaKnown RBP18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 CXXC1Q9P0U4 656 aaPredicted RBP18.77■□□□□ 0.6
TSPAN17-203ENST00000503030 MAFO75444 373 aaPredicted RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 RFC5P40937 340 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 LPIN1Q14693 890 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 PTPAQ15257 358 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 ECM1Q16610 540 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 KIZQ2M2Z5 673 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 TCTN1Q2MV58 587 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 LINC01465Q8N7H1 131 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 DBF4BQ8NFT6 615 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 ZNF668Q96K58 619 aaPredicted RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 NACC1Q96RE7 527 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 ANKEF1Q9NU02 776 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 DAXXQ9UER7 740 aaPredicted RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 STK24Q9Y6E0 443 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 LAMA2P24043 3122 aaKnown RBP18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 ARID2Q68CP9 1835 aa18.76■□□□□ 0.59
TSPAN17-203ENST00000503030 MYH15Q9Y2K3 1946 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 DNM2P50570 870 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 MKRN4PQ13434 485 aaPredicted RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 EMC2Q15006 297 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 FBXO47Q5MNV8 452 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 SEPT8Q92599 483 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 ZNF396Q96N95 335 aaPredicted RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 SCLT1Q96NL6 688 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 IFIH1Q9BYX4 1025 aaKnown RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 CDHR5Q9HBB8 845 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 DDX19AQ9NUU7 478 aaKnown RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 SUCLA2Q9P2R7 463 aaPredicted RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 KIAA1024Q9UPX6 916 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 PPME1Q9Y570 386 aa18.75■□□□□ 0.59
TSPAN17-203ENST00000503030 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 RARRES1P49788 294 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 NLRP11P59045 1033 aaKnown RBP18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 GRIN1Q05586 938 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 IKBKEQ14164 716 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 OSMRQ99650 979 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 DHX33Q9H6R0 707 aaKnown RBP18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 SLC4A7Q9Y6M7 1214 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
TSPAN17-203ENST00000503030 LOXHD1Q8IVV2 1947 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 SOX1O00570 391 aaPredicted RBP18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 USO1O60763 962 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 GPR32O75388 356 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 MUTP22033 750 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 CD52P31358 61 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 KCNJ6P48051 423 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 STK38Q15208 465 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 LRIT3Q3SXY7 679 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 RASIP1Q5U651 963 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 TSHZ1Q6ZSZ6 1077 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 NLRP7Q8WX94 980 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 CDK5RAP3Q96JB5 506 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 PLIN2Q99541 437 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 MTRQ99707 1265 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 MMTAG2Q9BU76 263 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 AGO3Q9H9G7 860 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 ATP6V0A4Q9HBG4 840 aa18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 DBR1Q9UK59 544 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-203ENST00000503030 ARHGEF35A5YM69 484 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 GRXCR1A8MXD5 290 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 LONP1P36776 959 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 GPC3P51654 580 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 CRYBB1P53674 252 aaPredicted RBP18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 PAK2Q13177 524 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 FAM109BQ6ICB4 259 aaPredicted RBP18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 CABP7Q86V35 215 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 KSR1Q8IVT5 923 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 TMEM40Q8WWA1 233 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 AK8Q96MA6 479 aa18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 NOC2LQ9Y3T9 749 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-203ENST00000503030 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 E9PMD0 336 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 RPS6KA5O75582 802 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 DGAT1O75907 488 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 BRD1O95696 1058 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 UBA7P41226 1012 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 WDR5P61964 334 aaKnown RBP18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 NFX1Q12986 1120 aaKnown RBP18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 SLC39A14Q15043 492 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms