RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 KCNA1Q09470 495 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 TCERG1LQ5VWI1 586 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 BTNL9Q6UXG8 535 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 KLHL7Q8IXQ5 586 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 BCAS4Q8TDM0 211 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 CALR3Q96L12 384 aaKnown RBP25.13■■□□□ 1.61
SNF8-202ENST00000502492 ISCUQ9H1K1 167 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 TAF1DQ9H5J8 278 aaPredicted RBP25.13■■□□□ 1.61
SNF8-202ENST00000502492 GCNT4Q9P109 453 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 BHMG1C9JSJ3 638 aaPredicted RBP25.13■■□□□ 1.61
SNF8-202ENST00000502492 HSPA9P38646 679 aaKnown RBP25.13■■□□□ 1.61
SNF8-202ENST00000502492 HDLBPQ00341 1268 aaKnown RBP25.13■■□□□ 1.61
SNF8-202ENST00000502492 RINT1Q6NUQ1 792 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 SUPT20HQ8NEM7 779 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 GOLPH3Q9H4A6 298 aa25.13■■□□□ 1.61
SNF8-202ENST00000502492 PIK3CDO00329 1044 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 CCT5P48643 541 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 ABCB5Q2M3G0 1257 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 VPS36Q86VN1 386 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 KIAA0825Q8IV33 1275 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 HSD17B14Q9BPX1 270 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 EIF3DO15371 548 aaKnown RBP eCLIP25.12■■□□□ 1.61
SNF8-202ENST00000502492 HOXA13P31271 388 aaPredicted RBP25.12■■□□□ 1.61
SNF8-202ENST00000502492 NFIL3Q16649 462 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 KDM7AQ6ZMT4 941 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 PSMD1Q99460 953 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 DBNDD1Q9H9R9 158 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 RGL1Q9NZL6 768 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 BCS1LQ9Y276 419 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 STXBP5LQ9Y2K9 1186 aa25.12■■□□□ 1.61
SNF8-202ENST00000502492 IGLV3-22A0A075B6J6 115 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 DDX3XO00571 662 aaKnown RBP eCLIP25.11■■□□□ 1.614e-14■■■■■ 27.5
SNF8-202ENST00000502492 CLIC2O15247 247 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 CEP104O60308 925 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 H2AFZP0C0S5 128 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 FKBP1AP62942 108 aaKnown RBP25.11■■□□□ 1.61
SNF8-202ENST00000502492 ERVK-9P63128 1117 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 H2AFVQ71UI9 128 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 DNAAF5Q86Y56 855 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 SH2D3CQ8N5H7 860 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 LMBR1Q8WVP7 490 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 FAM107BQ9H098 131 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 GDF11O95390 407 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 BMP3P12645 472 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 ECHS1P30084 290 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 NPEPPSP55786 919 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 IKQ13123 557 aaPredicted RBP25.11■■□□□ 1.61
SNF8-202ENST00000502492 CUL1Q13616 776 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 KCTD16Q68DU8 428 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 METTL13Q8N6R0 699 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.11■■□□□ 1.61
SNF8-202ENST00000502492 POLD4Q9HCU8 107 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 PCDHB13Q9Y5F0 798 aa25.11■■□□□ 1.61
SNF8-202ENST00000502492 ZMYM2Q9UBW7 1377 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 SRCAPQ6ZRS2 3230 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 PGRMC1O00264 195 aaKnown RBP25.1■■□□□ 1.61
SNF8-202ENST00000502492 EBAG9O00559 213 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 GFPT2O94808 682 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 FERP16591 822 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 TAL1P17542 331 aaPredicted RBP25.1■■□□□ 1.61
SNF8-202ENST00000502492 GJB7Q6PEY0 223 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 EFCAB13Q8IY85 973 aa25.1■■□□□ 1.61
SNF8-202ENST00000502492 SUCLA2Q9P2R7 463 aaPredicted RBP25.1■■□□□ 1.61
SNF8-202ENST00000502492 SHTN1A0MZ66 631 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 ANKRD65E5RJM6 399 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 SKIDA1Q1XH10 827 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 STRIP1Q5VSL9 837 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 RASGEF1CQ8N431 466 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 OLIG1Q8TAK6 271 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 TUFT1Q9NNX1 390 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 ZNF76P36508 570 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 DACT2Q5SW24 774 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 TTC19Q6DKK2 380 aaPredicted RBP25.09■■□□□ 1.61
SNF8-202ENST00000502492 C1orf186Q6ZWK4 172 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 SLC30A5Q8TAD4 765 aa25.09■■□□□ 1.61
SNF8-202ENST00000502492 PSMC2P35998 433 aaKnown RBP25.08■■□□□ 1.61
SNF8-202ENST00000502492 RBM5P52756 815 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNF8-202ENST00000502492 JAG1P78504 1218 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 PDCLQ13371 301 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 OTOP1Q7RTM1 612 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 PEX26Q7Z412 305 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 PPM1EQ8WY54 764 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 NOC2LQ9Y3T9 749 aaKnown RBP25.08■■□□□ 1.61
SNF8-202ENST00000502492 SFI1A8K8P3 1242 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 CCDC188H7C350 402 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 SART1O43290 800 aaKnown RBP25.08■■□□□ 1.61
SNF8-202ENST00000502492 SLITRK3O94933 977 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 STAT1P42224 750 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 AOC3Q16853 763 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 FAM186BQ8IYM0 893 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 SYCE1Q8N0S2 351 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 PIGOQ8TEQ8 1089 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 MKNK1Q9BUB5 465 aa25.08■■□□□ 1.61
SNF8-202ENST00000502492 FAM13AO94988 1023 aa25.07■■□□□ 1.6
SNF8-202ENST00000502492 CTTNQ14247 550 aaKnown RBP25.07■■□□□ 1.6
SNF8-202ENST00000502492 NT5DC3Q86UY8 548 aa25.07■■□□□ 1.6
SNF8-202ENST00000502492 TEX2Q8IWB9 1127 aa25.07■■□□□ 1.6
SNF8-202ENST00000502492 ATP6V1G3Q96LB4 118 aa25.07■■□□□ 1.6
SNF8-202ENST00000502492 SYT17Q9BSW7 474 aa25.07■■□□□ 1.6
SNF8-202ENST00000502492 NMT1P30419 496 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms