RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TCP10Q12799 353 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF268Q14587 947 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PAPD7Q5XG87 772 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 WDR59Q6PJI9 974 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ANKLE1Q8NAG6 615 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 STAMQ92783 540 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 AKT1S1Q96B36 256 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 VPS16Q9H269 839 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ENAMQ9NRM1 1142 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 SCINQ9Y6U3 715 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 V9GY48 417 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 MYH7BA7E2Y1 1941 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CARMIL3Q8ND23 1372 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCT8L1PA6NM43 557 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 PPP1R3GB7ZBB8 358 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF263O14978 683 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TFAP4Q01664 338 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 KRT40Q6A162 431 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ALKBH2Q6NS38 261 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 DPP8Q6V1X1 898 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SPATA4Q8NEY3 305 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 STIM2Q9P246 746 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CHMP2BQ9UQN3 213 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CD2APQ9Y5K6 639 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 MYH14Q7Z406 1995 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 XDHP47989 1333 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SPDYE16A6NNV3 312 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 PSMD14O00487 310 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SH2B2O14492 632 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 HIP1RO75146 1068 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TSPY3P0CV98 308 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TSPY8P0CW00 308 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 GNAZP19086 355 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 PRKCIP41743 596 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CYP4A11Q02928 519 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 MCL1Q07820 350 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CBX3Q13185 183 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCDC122Q5T0U0 273 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 OLFML1Q6UWY5 402 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ISLR2Q6UXK2 745 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SPATS2Q86XZ4 545 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF654Q8IZM8 581 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ANKRD13CQ8N6S4 541 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TTC8Q8TAM2 541 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CASKIN2Q8WXE0 1202 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMEM87BQ96K49 555 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 RUFY1Q96T51 708 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 NACA2Q9H009 215 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 VPS54Q9P1Q0 977 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ADD3Q9UEY8 706 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 IP6K2Q9UHH9 426 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 HPSEQ9Y251 543 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ITIH6Q6UXX5 1313 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 LRRD1A4D1F6 860 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 GOLGA8HP0CJ92 632 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 SETSIPP0DME0 302 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 IDEP14735 1019 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 NQO1P15559 274 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 GSTT1P30711 240 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 GJA8P48165 433 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 ERFP50548 548 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CACNB3P54284 484 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 DRP2Q13474 957 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 NSUN4Q96CB9 384 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CPVLQ9H3G5 476 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 EPB41L5Q9HCM4 733 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 CD209Q9NNX6 404 aa6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 AVENQ9NQS1 362 aaPredicted RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 METTL5Q9NRN9 209 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-218ENST00000498731 MYH6P13533 1939 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 C5orf60A6NFR6 353 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 BTBD18B2RXH4 712 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 H0YGN5 161 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 EIF3FO00303 357 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PPEF1O14829 653 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NDUFA10O95299 355 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NPTXRO95502 500 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATP2A2P16615 1042 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 GUCY1A2P33402 732 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 BTDP43251 543 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PLS1Q14651 629 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CDC37Q16543 378 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CFAP58Q5T655 872 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCDC70Q6NSX1 233 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 BRAPQ7Z569 592 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms