RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ERMP1Q7Z2K6 904 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 FAM228AQ86W67 206 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 NME8Q8N427 588 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 TDRD5Q8NAT2 981 aaKnown RBP10.42□□□□□ -0.74
CCDC171-209ENST00000498725 NCOA7Q8NI08 942 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 CYP2W1Q8TAV3 490 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 FEZF2Q8TBJ5 459 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 KCNG4Q8TDN1 519 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 AUTS2Q8WXX7 1259 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 CASP10Q92851 521 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 TNPO1Q92973 898 aaKnown RBP10.42□□□□□ -0.74
CCDC171-209ENST00000498725 ZNF668Q96K58 619 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-209ENST00000498725 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 KCNH7Q9NS40 1196 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 C1orf112Q9NSG2 853 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 TMEM161AQ9NX61 479 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 DBR1Q9UK59 544 aaKnown RBP10.42□□□□□ -0.74
CCDC171-209ENST00000498725 HCFC2Q9Y5Z7 792 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 STK25O00506 426 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 GPR182O15218 404 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 PI15O43692 258 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 MTHFRP42898 656 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 METAP2P50579 478 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC171-209ENST00000498725 ANTXR2P58335 489 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 PLCB3Q01970 1234 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 SMC1AQ14683 1233 aaKnown RBP10.41□□□□□ -0.74
CCDC171-209ENST00000498725 ODR4Q5SWX8 454 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 MCTP2Q6DN12 878 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 HEATR3Q7Z4Q2 680 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 KIAA0319LQ8IZA0 1049 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 SRBD1Q8N5C6 995 aaKnown RBP10.41□□□□□ -0.74
CCDC171-209ENST00000498725 METTL13Q8N6R0 699 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 CASD1Q96PB1 797 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 PHF12Q96QT6 1004 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 MXRA8Q9BRK3 442 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 ADAM7Q9H2U9 754 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 NGRNQ9NPE2 291 aaKnown RBP10.41□□□□□ -0.74
CCDC171-209ENST00000498725 SPG21Q9NZD8 308 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 LZTS1Q9Y250 596 aa10.41□□□□□ -0.74
CCDC171-209ENST00000498725 MYO15AQ9UKN7 3530 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 CLASP2O75122 1294 aaKnown RBP10.4□□□□□ -0.74
CCDC171-209ENST00000498725 CXCL14O95715 111 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 EPCAMP16422 314 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 KIF5BP33176 963 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 ITIH3Q06033 890 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 ITGB3BPQ13352 177 aaPredicted RBP10.4□□□□□ -0.74
CCDC171-209ENST00000498725 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 CWF19L1Q69YN2 538 aaKnown RBP10.4□□□□□ -0.74
CCDC171-209ENST00000498725 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 PLPPR4Q7Z2D5 763 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 HELQQ8TDG4 1101 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 NECTIN4Q96NY8 510 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 TMEM117Q9H0C3 514 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 RNF19AQ9NV58 838 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 FBXL21Q9UKT6 434 aa10.4□□□□□ -0.74
CCDC171-209ENST00000498725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 MED19A0JLT2 244 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CCDC69A6NI79 296 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 MAFGO15525 162 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 HBP1O60381 514 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 IGHDP01880 384 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 FGFR4P22455 802 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 PPM1AP35813 382 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 ZNF76P36508 570 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CLCN3P51790 818 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CLCN5P51795 746 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CRYBB1P53674 252 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 NUCB1Q02818 461 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 DSC3Q14574 896 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 ANGPT1Q15389 498 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 LONRF3Q496Y0 759 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 SWSAP1Q6NVH7 229 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CASC1Q6TDU7 716 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 TMC5Q6UXY8 1006 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 SMC5Q8IY18 1101 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 KIAA2013Q8IYS2 634 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 LRRC43Q8N309 656 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 RWDD1Q9H446 243 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 AGO4Q9HCK5 861 aaKnown RBP10.39□□□□□ -0.75
CCDC171-209ENST00000498725 ZNF302Q9NR11 478 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
CCDC171-209ENST00000498725 VPS13AQ96RL7 3174 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 NFASCO94856 1347 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 PRC1O43663 620 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 DDAH1O94760 285 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 CCNE2O96020 404 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-209ENST00000498725 RFX1P22670 979 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 BCAR1P56945 870 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms