RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	CEP72	Q9P209	647 aa		5.71	□□□□□ -1.5
USP34-222	ENST00000498268	ATP2B1	P20020	1258 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	SDHA	P31040	664 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
USP34-222	ENST00000498268	ANTXR2	P58335	489 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	ZC3H6	P61129	1189 aa	Known RBP	5.7	□□□□□ -1.5
USP34-222	ENST00000498268	ATP2C1	P98194	919 aa	Predicted RBP	5.7	□□□□□ -1.5
USP34-222	ENST00000498268	NBPF6	Q5VWK0	638 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	WDR48	Q8TAF3	677 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	NEU4	Q8WWR8	484 aa	Predicted RBP	5.7	□□□□□ -1.5
USP34-222	ENST00000498268	NBPF4	Q96M43	638 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	DNAJC7	Q99615	494 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	NELFA	Q9H3P2	528 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	MMRN2	Q9H8L6	949 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	SNTG2	Q9NY99	539 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	C11orf21	Q9P2W6	132 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	SH3BP1	Q9Y3L3	701 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	ASB1	Q9Y576	335 aa		5.7	□□□□□ -1.5
USP34-222	ENST00000498268	TCRBV16S1A1N1	A0A5B0	115 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	DPT	Q07507	201 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	RIN1	Q13671	783 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	TRIM61	Q5EBN2	209 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	ZNF627	Q7L945	461 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.69	□□□□□ -1.5
USP34-222	ENST00000498268	D2HGDH	Q8N465	521 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	IGSF22	Q8N9C0	903 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	LARP4B	Q92615	738 aa	Known RBP	5.69	□□□□□ -1.5
USP34-222	ENST00000498268	DEPDC7	Q96QD5	511 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	CEP89	Q96ST8	783 aa		5.69	□□□□□ -1.5
USP34-222	ENST00000498268	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.69	□□□□□ -1.5
USP34-222	ENST00000498268	SLC12A8	A0AV02	714 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	C2orf78	A6NCI8	922 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	DVL2	O14641	736 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	MCM7	P33993	719 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	ADCY7	P51828	1080 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	TUBA3C	Q13748	450 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	RRP1B	Q14684	758 aa	Known RBP	5.68	□□□□□ -1.5
USP34-222	ENST00000498268	TMEM177	Q53S58	311 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	TUBA3E	Q6PEY2	450 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	BRAP	Q7Z569	592 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.68	□□□□□ -1.5
USP34-222	ENST00000498268	SLC2A4RG	Q9NR83	387 aa		5.68	□□□□□ -1.5
USP34-222	ENST00000498268	PMS2P1	A4D2B8	440 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	CAPN14	A8MX76	684 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	EFCAB14	O75071	495 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	APEX1	P27695	318 aa	Known RBP	5.67	□□□□□ -1.5
USP34-222	ENST00000498268	RGS3	P49796	1198 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	ALDH6A1	Q02252	535 aa	Known RBP	5.67	□□□□□ -1.5
USP34-222	ENST00000498268	RBL2	Q08999	1139 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	ADGRE4P	Q86SQ3	457 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	LDLRAD3	Q86YD5	345 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	TMPRSS6	Q8IU80	811 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	AMER2	Q8N7J2	671 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	C2orf69	Q8N8R5	385 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	JMY	Q8N9B5	988 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	GPHA2	Q96T91	129 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	TRIM39	Q9HCM9	518 aa		5.67	□□□□□ -1.5
USP34-222	ENST00000498268	KRTAP23-1	A1A580	65 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	KCNQ2	O43526	872 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	SCNN1G	P51170	649 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	ADAM8	P78325	824 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	SLC25A3	Q00325	362 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	IRF9	Q00978	393 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268		Q6ZPA2	131 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268		Q6ZRM9	215 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	RABGGTA	Q92696	567 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	RPL10L	Q96L21	214 aa	Known RBP	5.66	□□□□□ -1.5
USP34-222	ENST00000498268	GIT1	Q9Y2X7	761 aa		5.66	□□□□□ -1.5
USP34-222	ENST00000498268	KRT37	O76014	449 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	KRT4	P19013	534 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	MECP2	P51608	486 aa	Known RBP	5.65	□□□□□ -1.5
USP34-222	ENST00000498268	OTOP1	Q7RTM1	612 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.65	□□□□□ -1.5
USP34-222	ENST00000498268	LILRB2	Q8N423	598 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	CLIP3	Q96DZ5	547 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	CLUHP3	Q96NS8	147 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	KRTAP9-8	Q9BYQ0	159 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	MSL2	Q9HCI7	577 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	SFMBT1	Q9UHJ3	866 aa		5.65	□□□□□ -1.5
USP34-222	ENST00000498268	WDR33	Q9C0J8	1336 aa	Known RBP	5.65	□□□□□ -1.51
USP34-222	ENST00000498268		A0A1W2PRX2	142 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268		E9PSI1	815 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	MAF	O75444	373 aa	Predicted RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268	TGM1	P22735	817 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	SLC6A3	Q01959	620 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	HHEX	Q03014	270 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	SMN1	Q16637	294 aa	Known RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268	KRTAP15-1	Q3LI76	137 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268	LRP10	Q7Z4F1	713 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	CALML6	Q8TD86	181 aa		5.64	□□□□□ -1.51
USP34-222	ENST00000498268	ZNF483	Q8TF39	744 aa	Predicted RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268	RBM8A	Q9Y5S9	174 aa	Known RBP	5.64	□□□□□ -1.51
USP34-222	ENST00000498268		A0A087X1B8	175 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268		M0R2C6	588 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	KLHDC10	Q6PID8	442 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	PCSK4	Q6UW60	755 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	GAREM2	Q75VX8	874 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	ANKRD53	Q8N9V6	530 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms