RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 HAS1Q92839 578 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
NUP50-219ENST00000497960 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
NUP50-219ENST00000497960 TTC3P53804 2025 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 SIP14410 1827 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 GJB2P29033 226 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 QARSP47897 775 aaKnown RBP17.2■□□□□ 0.34
NUP50-219ENST00000497960 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
NUP50-219ENST00000497960 FBXO22Q8NEZ5 403 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 GDPD5Q8WTR4 605 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 OSMRQ99650 979 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 C17orf80Q9BSJ5 609 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 ST3GAL5Q9UNP4 418 aa17.2■□□□□ 0.34
NUP50-219ENST00000497960 DLL1O00548 723 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 GPR32O75388 356 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 P4HBP07237 508 aaKnown RBP17.19■□□□□ 0.34
NUP50-219ENST00000497960 DNM2P50570 870 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 NLRP11P59045 1033 aaKnown RBP17.19■□□□□ 0.34
NUP50-219ENST00000497960 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 BECN1Q14457 450 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 EPHA7Q15375 998 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
NUP50-219ENST00000497960 CALCRLQ16602 461 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 NCAPH2Q6IBW4 605 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 RTN4RL1Q86UN2 441 aaPredicted RBP17.19■□□□□ 0.34
NUP50-219ENST00000497960 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 LINC01465Q8N7H1 131 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 LINC01599Q8WXQ3 324 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
NUP50-219ENST00000497960 LMCD1Q9NZU5 365 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 LRFN2Q9ULH4 789 aa17.19■□□□□ 0.34
NUP50-219ENST00000497960 DENND3A2RUS2 1198 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 NEMFO60524 1076 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 LPXNO60711 386 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 STBD1O95210 358 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 CDC42EP1Q00587 391 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 EPC2Q52LR7 807 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 TMEM192Q8IY95 271 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
NUP50-219ENST00000497960 ADAMTS10Q9H324 1103 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 PRDM6Q9NQX0 595 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 C1orf112Q9NSG2 853 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 THEGQ9P2T0 379 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 ADGRA3Q8IWK6 1321 aa17.18■□□□□ 0.34
NUP50-219ENST00000497960 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 TMEM150BA6NC51 233 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 DGKIO75912 1065 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 ATP2B1P20020 1258 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
NUP50-219ENST00000497960 BTG3Q14201 252 aaPredicted RBP17.17■□□□□ 0.34
NUP50-219ENST00000497960 FAM228AQ86W67 206 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
NUP50-219ENST00000497960 ADAM2Q99965 735 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
NUP50-219ENST00000497960 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 RWDD3Q9Y3V2 267 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
NUP50-219ENST00000497960 IBSPP21815 317 aaPredicted RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 GPC3P51654 580 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 PTPROQ16827 1216 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 PLA2G4FQ68DD2 849 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 SLC24A5Q71RS6 500 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 ANO5Q75V66 913 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 OTUD6AQ7L8S5 288 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 C4orf19Q8IY42 314 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 ATXN2LQ8WWM7 1075 aaKnown RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 ZNF668Q96K58 619 aaPredicted RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 CEP170P1Q96L14 293 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 CEP89Q96ST8 783 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 LXNQ9BS40 222 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
NUP50-219ENST00000497960 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 RGS18Q9NS28 235 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 PPME1Q9Y570 386 aa17.16■□□□□ 0.34
NUP50-219ENST00000497960 PCDHB7Q9Y5E2 793 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms