RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 YBX2Q9Y2T7 364 aaKnown RBP9.2□□□□□ -0.94
VPS45-210ENST00000497638 SYNRGQ9UMZ2 1314 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 A0A0U1RQG5 324 aaPredicted RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 GPR182O15218 404 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 TLR3O15455 904 aaKnown RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 FGBP02675 491 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 POU3F3P20264 500 aaPredicted RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 CST5P28325 142 aaPredicted RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 CDK7P50613 346 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS45-210ENST00000497638 KCTD2Q14681 263 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 CYP27C1Q4G0S4 372 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 CCSAPQ6IQ19 270 aaPredicted RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 MSL3Q8N5Y2 521 aaKnown RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 PCSK9Q8NBP7 692 aaKnown RBP9.19□□□□□ -0.94
VPS45-210ENST00000497638 MMP19Q99542 508 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 PCDHA11Q9Y5I1 949 aa9.19□□□□□ -0.94
VPS45-210ENST00000497638 ARVCFO00192 962 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 TMPRSS2O15393 492 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 DUSP11O75319 330 aaKnown RBP9.18□□□□□ -0.94
VPS45-210ENST00000497638 FLOT1O75955 427 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 GUCY1A2P33402 732 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 SHMT1P34896 483 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 COPB2P35606 906 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 MTX1Q13505 466 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 SEPT2Q15019 361 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 KCNA10Q16322 511 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 ZNF792Q3KQV3 632 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 ALDH1L2Q3SY69 923 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 DTHD1Q6ZMT9 781 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 CBLL1Q75N03 491 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 FAM126BQ8IXS8 530 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 ATG4CQ96DT6 458 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 WDR89Q96FK6 387 aaPredicted RBP9.18□□□□□ -0.94
VPS45-210ENST00000497638 ASIC4Q96FT7 647 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 ARID3AQ99856 593 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 KRTAP9-9Q9BYP9 154 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 KRTAP9-4Q9BYQ2 154 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 CCDC86Q9H6F5 360 aaKnown RBP9.18□□□□□ -0.94
VPS45-210ENST00000497638 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
VPS45-210ENST00000497638 FAM86C2PA6NEL3 165 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 PRR33A8MZF0 331 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 PI4K2BG5E9Z4 385 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 PGK2P07205 417 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 MRE11P49959 708 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 DYNLL1P63167 89 aaKnown RBP9.17□□□□□ -0.94
VPS45-210ENST00000497638 ID3Q02535 119 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 GRM2Q14416 872 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 TTC39AQ5SRH9 613 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 RIOX2Q8IUF8 465 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 EPS8L3Q8TE67 593 aaKnown RBP9.17□□□□□ -0.94
VPS45-210ENST00000497638 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 ATXN3LQ9H3M9 355 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 SH2D4AQ9H788 454 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 SPC25Q9HBM1 224 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 GPN3Q9UHW5 284 aaPredicted RBP9.17□□□□□ -0.94
VPS45-210ENST00000497638 SLC5A6Q9Y289 635 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 MTCH2Q9Y6C9 303 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 SLC4A7Q9Y6M7 1214 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
VPS45-210ENST00000497638 A0A1W2PRG0 241 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 SMIM22K7EJ46 135 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 RNGTTO60942 597 aaKnown RBP9.16□□□□□ -0.94
VPS45-210ENST00000497638 CD4P01730 458 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 ASGR1P07306 291 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 C6orf222P0C671 652 aaPredicted RBP9.16□□□□□ -0.94
VPS45-210ENST00000497638 CYP7A1P22680 504 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 CYP2C18P33260 490 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 TMEM132BQ14DG7 1078 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 CCDC158Q5M9N0 1113 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
VPS45-210ENST00000497638 OTOP2Q7RTS6 562 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 MEIS3Q99687 375 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 UPF3AQ9H1J1 476 aaKnown RBP9.16□□□□□ -0.94
VPS45-210ENST00000497638 HIPK3Q9H422 1215 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 CRIM1Q9NZV1 1036 aa9.16□□□□□ -0.94
VPS45-210ENST00000497638 MYO5AQ9Y4I1 1855 aaKnown RBP9.16□□□□□ -0.94
VPS45-210ENST00000497638 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 MYADML2A6NDP7 307 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 MPHOSPH10O00566 681 aaKnown RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 WDR46O15213 610 aaKnown RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 GNAI3P08754 354 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 GSTP1P09211 210 aaKnown RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 ATP2A2P16615 1042 aaKnown RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 RABGGTBP53611 331 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 GJA9P57773 515 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 PPP2R3AQ06190 1150 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 GABPAQ06546 454 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS45-210ENST00000497638 CDK5R2Q13319 367 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 MAMDC4Q6UXC1 1216 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.94
VPS45-210ENST00000497638 RPUSD2Q8IZ73 545 aaKnown RBP9.15□□□□□ -0.94
VPS45-210ENST00000497638 GLIS3Q8NEA6 775 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms