RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TMEM150BA6NC51 233 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 DCDC2CA8MYV0 355 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 TLR3O15455 904 aaKnown RBP22.33■■□□□ 1.17
CTSD-206ENST00000497544 NPEPPSP55786 919 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 GDF6Q6KF10 455 aaPredicted RBP22.33■■□□□ 1.17
CTSD-206ENST00000497544 BADQ92934 168 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 CYP26B1Q9NR63 512 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 DBR1Q9UK59 544 aaKnown RBP22.33■■□□□ 1.17
CTSD-206ENST00000497544 NOD1Q9Y239 953 aa22.33■■□□□ 1.17
CTSD-206ENST00000497544 EVPLQ92817 2033 aa22.33■■□□□ 1.16
CTSD-206ENST00000497544 A0A1W2PQ27 194 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 A0A1W2PQ64 194 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 A0A1W2PQD8 194 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 E9PMD0 336 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 PLCG1P19174 1290 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 KLRC1P26715 233 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 MRPS5P82675 430 aaKnown RBP22.32■■□□□ 1.16
CTSD-206ENST00000497544 ZNF200P98182 395 aaPredicted RBP22.32■■□□□ 1.16
CTSD-206ENST00000497544 TARBP2Q15633 366 aaKnown RBP22.32■■□□□ 1.16
CTSD-206ENST00000497544 PTGISQ16647 500 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 TMEM119Q4V9L6 283 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 PLA2G4FQ68DD2 849 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 CCDC73Q6ZRK6 1079 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 PDILTQ8N807 584 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 LMBR1Q8WVP7 490 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 TRAPPC12Q8WVT3 735 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 SH2D3AQ9BRG2 576 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 LRFN3Q9BTN0 628 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 ATP11BQ9Y2G3 1177 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 PPME1Q9Y570 386 aa22.32■■□□□ 1.16
CTSD-206ENST00000497544 ARHGEF35A5YM69 484 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 MAGEB2O15479 319 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 PQBP1O60828 265 aaKnown RBP22.31■■□□□ 1.16
CTSD-206ENST00000497544 EYA4O95677 639 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 RARRES1P49788 294 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 TBC1D8BQ0IIM8 1120 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 SNX17Q15036 470 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 TRIM60Q495X7 471 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 ALYREFQ86V81 257 aaKnown RBP22.31■■□□□ 1.16
CTSD-206ENST00000497544 NECAB3Q96P71 396 aaPredicted RBP22.31■■□□□ 1.16
CTSD-206ENST00000497544 BHMT2Q9H2M3 363 aa22.31■■□□□ 1.16
CTSD-206ENST00000497544 A0A1B0GVL5 298 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 TREHO43280 583 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 B4GALT4O60513 344 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 PRPF40AO75400 957 aaKnown RBP22.3■■□□□ 1.16
CTSD-206ENST00000497544 SSBP05455 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
CTSD-206ENST00000497544 STAT6P42226 847 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 ADAM17P78536 824 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 TLE2Q04725 743 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 HIC1Q14526 733 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 MTHFD1LQ6UB35 978 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 ANKRD33Q7Z3H0 272 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 KCNK18Q7Z418 384 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 FAM126BQ8IXS8 530 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 EXOC8Q8IYI6 725 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 FSIP1Q8NA03 581 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 TMEM87AQ8NBN3 555 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 TOX2Q96NM4 488 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 JPH2Q9BR39 696 aaPredicted RBP22.3■■□□□ 1.16
CTSD-206ENST00000497544 PYM1Q9BRP8 204 aaKnown RBP22.3■■□□□ 1.16
CTSD-206ENST00000497544 TRMT13Q9NUP7 481 aaKnown RBP22.3■■□□□ 1.16
CTSD-206ENST00000497544 STK17AQ9UEE5 414 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 TUBE1Q9UJT0 475 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 KCNH3Q9ULD8 1083 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 MUC6Q6W4X9 2439 aa22.3■■□□□ 1.16
CTSD-206ENST00000497544 LOXHD1Q8IVV2 1947 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 GOLGA6L22H0YM25 854 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 HOXC8P31273 242 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 POLGP54098 1239 aaPredicted RBP22.29■■□□□ 1.16
CTSD-206ENST00000497544 MARCH8Q5T0T0 291 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 IQUBQ8NA54 791 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 RETREG2Q8NC44 543 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 MRPS27Q92552 414 aaKnown RBP22.29■■□□□ 1.16
CTSD-206ENST00000497544 TRPV6Q9H1D0 765 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 PRDM5Q9NQX1 630 aaPredicted RBP22.29■■□□□ 1.16
CTSD-206ENST00000497544 MYO9BQ13459 2157 aa22.29■■□□□ 1.16
CTSD-206ENST00000497544 MBLAC1A4D2B0 266 aaPredicted RBP22.28■■□□□ 1.16
CTSD-206ENST00000497544 POLR2DO15514 142 aaKnown RBP22.28■■□□□ 1.16
CTSD-206ENST00000497544 PLA2G4BP0C869 781 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 PFKFB1P16118 471 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 RFC5P40937 340 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 DHX8Q14562 1220 aaKnown RBP22.28■■□□□ 1.16
CTSD-206ENST00000497544 EFCAB12Q6NXP0 572 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 PADI6Q6TGC4 694 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 METTL13Q8N6R0 699 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 SYT2Q8N9I0 419 aaPredicted RBP22.28■■□□□ 1.16
CTSD-206ENST00000497544 SLC7A3Q8WY07 619 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 RAD54LQ92698 747 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 DHX58Q96C10 678 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 CEP89Q96ST8 783 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 SUGCTQ9HAC7 445 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 PCDHA2Q9Y5H9 948 aa22.28■■□□□ 1.16
CTSD-206ENST00000497544 A0A087X0B3 334 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 MAFO75444 373 aaPredicted RBP22.27■■□□□ 1.16
CTSD-206ENST00000497544 DGAT1O75907 488 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 CD4P01730 458 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 CYP2C9P11712 490 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 DNAJB2P25686 324 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 TMOD1P28289 359 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms