RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 GPRC5DQ9NZD1 345 aa5.49□□□□□ -1.53
CMSS1-209ENST00000497345 VPS54Q9P1Q0 977 aa5.49□□□□□ -1.53
CMSS1-209ENST00000497345 GPN3Q9UHW5 284 aaPredicted RBP5.49□□□□□ -1.53
CMSS1-209ENST00000497345 SLC5A6Q9Y289 635 aa5.49□□□□□ -1.53
CMSS1-209ENST00000497345 PCDHGC5Q9Y5F6 944 aa5.49□□□□□ -1.53
CMSS1-209ENST00000497345 CCDC196A0A1B0GTZ2 297 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 ADM5C9JUS6 153 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 GOLGA6L22H0YM25 854 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 TTLL1O95922 423 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 FAM87AP0C7U9 286 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 KIF5BP33176 963 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 ECE1P42892 770 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 PLCB3Q01970 1234 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 ICA1Q05084 483 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 TROAPQ12815 778 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 IKQ13123 557 aaPredicted RBP5.48□□□□□ -1.53
CMSS1-209ENST00000497345 RESTQ13127 1097 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 CDK5R2Q13319 367 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 TTLL4Q14679 1199 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 GRM4Q14833 912 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 NTRK3Q16288 839 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 CCDC178Q5BJE1 867 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 SLFN13Q68D06 897 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 KRT40Q6A162 431 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 TMTC3Q6ZXV5 915 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 HEATR3Q7Z4Q2 680 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 DGKHQ86XP1 1220 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 FBXL16Q8N461 479 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 ZBED3Q96IU2 234 aaPredicted RBP5.48□□□□□ -1.53
CMSS1-209ENST00000497345 FEZ1Q99689 392 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 FTOQ9C0B1 505 aaKnown RBP eCLIP5.48□□□□□ -1.53
CMSS1-209ENST00000497345 DEFB129Q9H1M3 183 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 TCP11L1Q9NUJ3 509 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 RBM28Q9NW13 759 aaKnown RBP5.48□□□□□ -1.53
CMSS1-209ENST00000497345 MTMR4Q9NYA4 1195 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 PCOLCE2Q9UKZ9 415 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 KIF3AQ9Y496 699 aa5.48□□□□□ -1.53
CMSS1-209ENST00000497345 BAZ2BQ9UIF8 2168 aaKnown RBP5.48□□□□□ -1.53
CMSS1-209ENST00000497345 SBF1O95248 1867 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 SIPA1L1O43166 1804 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 IGKV6D-41A0A0C4DH26 115 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 KIF28PB7ZC32 967 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 KLRF2D3W0D1 207 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 RNGTTO60942 597 aaKnown RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 VEGFAP15692 232 aaPredicted RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 IFNAR1P17181 557 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 JUNBP17275 347 aaPredicted RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 ITGB5P18084 799 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 ARNTP27540 789 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 NLRP5P59047 1200 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 TNFAIP1Q13829 316 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 DSC3Q14574 896 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 TMEM179Q6ZVK1 233 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 SPRED2Q7Z698 418 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 USP48Q86UV5 1035 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 ACER1Q8TDN7 264 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 STK35Q8TDR2 534 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 WASF1Q92558 559 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 ANKS1AQ92625 1134 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 DPF2Q92785 391 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 DCPSQ96C86 337 aaKnown RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 PIGSQ96S52 555 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 MTA3Q9BTC8 594 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 GLIS2Q9BZE0 524 aaPredicted RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 BIN2Q9UBW5 565 aaPredicted RBP5.47□□□□□ -1.53
CMSS1-209ENST00000497345 MAD2L2Q9UI95 211 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 DCTN4Q9UJW0 460 aa5.47□□□□□ -1.53
CMSS1-209ENST00000497345 A0A1W2PRG0 241 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 BTBD18B2RXH4 712 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 F5H6K3 240 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 ADAMTS3O15072 1205 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 PRPF3O43395 683 aaKnown RBP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 GRIN3BO60391 1043 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 DEXIO95424 95 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 PDHBP11177 359 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 EPHX2P34913 555 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SLC1A4P43007 532 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 KLRC3Q07444 240 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 BNIP3Q12983 259 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SAFBQ15424 915 aaKnown RBP eCLIP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SF3A1Q15459 793 aaKnown RBP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 PKN1Q16512 942 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SLC35G1Q2M3R5 365 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 ZC3H12AQ5D1E8 599 aaKnown RBP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 KIAA1755Q5JYT7 1200 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 TATDN1Q6P1N9 297 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 NXPE4Q6UWF7 544 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 ZNF574Q6ZN55 896 aaPredicted RBP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 MOB2Q70IA6 237 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 FAM83AQ86UY5 434 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 WFDC3Q8IUB2 231 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SIAH1Q8IUQ4 282 aa5.46□□□□□ -1.54
CMSS1-209ENST00000497345 APOBEC3FQ8IUX4 373 aaKnown RBP5.46□□□□□ -1.54
CMSS1-209ENST00000497345 SULF2Q8IWU5 870 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms