RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KIAA1841Q6NSI8 718 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 UNQ6494/PRO21346Q6UXR6 183 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
VPS36-206ENST00000497149 ACAP3Q96P50 834 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 WASHC2AQ641Q2 1341 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 PRSS38A1L453 326 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 ALDH1L1O75891 902 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 TSPAN15O95858 294 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 KNG1P01042 644 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
VPS36-206ENST00000497149 CHGBP05060 677 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 GPR3P46089 330 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 MANFP55145 182 aaKnown RBP6.49□□□□□ -1.37
VPS36-206ENST00000497149 MLLT6P55198 1093 aaPredicted RBP6.49□□□□□ -1.37
VPS36-206ENST00000497149 BCAR1P56945 870 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 FSCN1Q16658 493 aaKnown RBP6.49□□□□□ -1.37
VPS36-206ENST00000497149 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 KANK2Q63ZY3 851 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 ORAI2Q96SN7 254 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 SMAD5Q99717 465 aaKnown RBP6.49□□□□□ -1.37
VPS36-206ENST00000497149 SPEF1Q9Y4P9 236 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 TNKSO95271 1327 aa6.49□□□□□ -1.37
VPS36-206ENST00000497149 CLEC2LP0C7M8 214 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 COL6A1P12109 1028 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 ENPP1P22413 925 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 IL13P35225 146 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
VPS36-206ENST00000497149 CD83Q01151 205 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 CAP1Q01518 475 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 DLX2Q07687 328 aaPredicted RBP6.48□□□□□ -1.37
VPS36-206ENST00000497149 ZNF385BQ569K4 471 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 CT83Q5H943 113 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 ZBTB41Q5SVQ8 909 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 RPGRQ92834 1020 aaKnown RBP6.48□□□□□ -1.37
VPS36-206ENST00000497149 FERMT2Q96AC1 680 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 WNT8AQ9H1J5 351 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 METTL14Q9HCE5 456 aaKnown RBP6.48□□□□□ -1.37
VPS36-206ENST00000497149 TMPRSS11EQ9UL52 423 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 PPP2R3BQ9Y5P8 575 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 NUMBLQ9Y6R0 609 aa6.48□□□□□ -1.37
VPS36-206ENST00000497149 SHTN1A0MZ66 631 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 RFXAPO00287 272 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 MAFO75444 373 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 MYBL2P10244 700 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 RPL13P26373 211 aaKnown RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 RAP1GAPP47736 663 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 NFATC3Q12968 1075 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 TTF1Q15361 905 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 KCNA10Q16322 511 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 UGT8Q16880 541 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 ABCB5Q2M3G0 1257 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 WDR72Q3MJ13 1102 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 VWA3BQ502W6 1294 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 ODR4Q5SWX8 454 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 CCDC62Q6P9F0 684 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 PGM2L1Q6PCE3 622 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 TTLL7Q6ZT98 887 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 C1orf162Q8NEQ5 155 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 ZNF526Q8TF50 670 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 EAF2Q96CJ1 260 aaPredicted RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 FUBP3Q96I24 572 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS36-206ENST00000497149 FAXDC2Q96IV6 333 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 DENND2AQ9ULE3 1009 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 THRAP3Q9Y2W1 955 aaKnown RBP6.47□□□□□ -1.37
VPS36-206ENST00000497149 MYPNQ86TC9 1320 aa6.47□□□□□ -1.37
VPS36-206ENST00000497149 ST20-MTHFSA0A0A6YYL1 179 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 TRIM75PA6NK02 468 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 H0Y858 1186 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 H2AFYO75367 372 aaKnown RBP6.46□□□□□ -1.38
VPS36-206ENST00000497149 MT-CO1P00395 513 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 CFBP00751 764 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 PFKMP08237 780 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 NEK2P51955 445 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 LINC00310P59036 64 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 PTPN21Q16825 1174 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 PITRM1Q5JRX3 1037 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 TRMT10BQ6PF06 316 aaKnown RBP6.46□□□□□ -1.38
VPS36-206ENST00000497149 ZCCHC14Q8WYQ9 949 aaKnown RBP6.46□□□□□ -1.38
VPS36-206ENST00000497149 PITHD1Q9GZP4 211 aaPredicted RBP6.46□□□□□ -1.38
VPS36-206ENST00000497149 MTG2Q9H4K7 406 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 KCMF1Q9P0J7 381 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 FTSJ1Q9UET6 329 aa6.46□□□□□ -1.38
VPS36-206ENST00000497149 A0A0A6YYJ9 748 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 SH3D21A4FU49 640 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 FZD9O00144 591 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS36-206ENST00000497149 FFAR3O14843 346 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 MAFGO15525 162 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 PCDH8O95206 1070 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 RBP3P10745 1247 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 ZNF28P17035 718 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 GRAMD4Q6IC98 578 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 CHMP4CQ96CF2 233 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms