RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 TAF2Q6P1X5 1199 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 C12orf76Q8N812 135 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 DTWD2Q8NBA8 298 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 TM6SF1Q9BZW5 370 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 R4GN57 208 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 EP300Q09472 2414 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 CCDC69A6NI79 296 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 KLRF2D3W0D1 207 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 NOP56O00567 594 aaKnown RBP11.22□□□□□ -0.61
SRSF4-205ENST00000497015 LMNAP02545 664 aaKnown RBP11.22□□□□□ -0.61
SRSF4-205ENST00000497015 SCG2P13521 617 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-205ENST00000497015 CCND2P30279 289 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 CLCN1P35523 988 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
SRSF4-205ENST00000497015 SP4Q02446 784 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 TMEM62Q0P6H9 643 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 GRIK4Q16099 956 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 ZNF654Q8IZM8 581 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 ZDHHC14Q8IZN3 488 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 CTCFLQ8NI51 663 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-205ENST00000497015 AMNQ9BXJ7 453 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 RIOX1Q9H6W3 641 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 NR2E1Q9Y466 385 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 PCDHB12Q9Y5F1 795 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 SNX14Q9Y5W7 946 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
SRSF4-205ENST00000497015 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 STAG3L1P0CL83 205 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 MARK3P27448 753 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PLCB3Q01970 1234 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PDE4CQ08493 712 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 NEDD9Q14511 834 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 ADCK5Q3MIX3 580 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PDE12Q6L8Q7 609 aaKnown RBP11.21□□□□□ -0.61
SRSF4-205ENST00000497015 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 MRPS27Q92552 414 aaKnown RBP11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PCYT2Q99447 389 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 SPZ1Q9BXG8 430 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 MFSD1Q9H3U5 465 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 TUBE1Q9UJT0 475 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.61
SRSF4-205ENST00000497015 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.62
SRSF4-205ENST00000497015 NID2Q14112 1375 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 FRMPD4Q14CM0 1322 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 ZBTB5O15062 677 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 INSRRP14616 1297 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 FECHP22830 423 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 PBX3P40426 434 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 PPFIA1Q13136 1202 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 RSPO4Q2I0M5 234 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 THNSL1Q8IYQ7 743 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 TCF25Q9BQ70 676 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 RALYQ9UKM9 306 aaKnown RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-205ENST00000497015 LZTS1Q9Y250 596 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
SRSF4-205ENST00000497015 KRBA1A5PL33 1030 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 C9IYK1 514 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 GCOM1H8Y6P7 765 aaPredicted RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 CLASP2O75122 1294 aaKnown RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 POLR2MP0CAP2 368 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 FGFR1P11362 822 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 RPS6KB1P23443 525 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 EVCP57679 992 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 IGBP1P78318 339 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 FAM189BP81408 668 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms