RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
GCOM1-212ENST00000496627 GNGT1P63211 74 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
GCOM1-212ENST00000496627 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
GCOM1-212ENST00000496627 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 CCDC174Q6PII3 467 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 C1orf186Q6ZWK4 172 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 PEX26Q7Z412 305 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 EHMT1Q9H9B1 1298 aa16.06■□□□□ 0.16
GCOM1-212ENST00000496627 A0A0A6YYK5 440 aaPredicted RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 GCOM1H8Y6P7 765 aaPredicted RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 GAS7O60861 476 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 PSMD10O75832 226 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SLITRK3O94933 977 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 POLR2MP0CAP2 368 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 ECE1P42892 770 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 PRELPP51888 382 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 PPP2R5CQ13362 524 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SKIDA1Q1XH10 827 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 STXBP4Q6ZWJ1 553 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 IKZF4Q9H2S9 585 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 NENFQ9UMX5 172 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 UBE4BO95155 1302 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SHTN1A0MZ66 631 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.161e-13■■■■■ 33.4
GCOM1-212ENST00000496627 UBXN2AP68543 259 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 HLTFQ14527 1009 aaKnown RBP eCLIP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 NFIL3Q16649 462 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 AOC3Q16853 763 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SLC5A5Q92911 643 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 BORCS6Q96GS4 357 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 TAF1DQ9H5J8 278 aaPredicted RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 SEL1LQ9UBV2 794 aa16.05■□□□□ 0.16
GCOM1-212ENST00000496627 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
GCOM1-212ENST00000496627 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 H0YIN7 160 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 KRT14P02533 472 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 POLD1P28340 1107 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 FMO5P49326 533 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 IQCKQ8N0W5 287 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 CALR3Q96L12 384 aaKnown RBP16.04■□□□□ 0.16
GCOM1-212ENST00000496627 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCOM1-212ENST00000496627 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 FRMD4BQ9Y2L6 1034 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 ZBTB39O15060 712 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 EIF3HO15372 352 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCOM1-212ENST00000496627 EVI5O60447 810 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 SOX5P35711 763 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 CYP2J2P51589 502 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 SKOR1P84550 965 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 COG2Q14746 738 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 TRADDQ15628 312 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 KSR1Q8IVT5 923 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 PRMT6Q96LA8 375 aaPredicted RBP16.04■□□□□ 0.16
GCOM1-212ENST00000496627 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
GCOM1-212ENST00000496627 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
GCOM1-212ENST00000496627 ZNF233A6NK53 670 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.03■□□□□ 0.16
GCOM1-212ENST00000496627 NACC1Q96RE7 527 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
GCOM1-212ENST00000496627 F8VZ95 297 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 LMNB1P20700 586 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 CUL1Q13616 776 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 ODR4Q5SWX8 454 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 TTC19Q6DKK2 380 aaPredicted RBP16.03■□□□□ 0.16
GCOM1-212ENST00000496627 STYK1Q6J9G0 422 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 FLAD1Q8NFF5 587 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 LNX1Q8TBB1 728 aaPredicted RBP16.03■□□□□ 0.16
GCOM1-212ENST00000496627 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 STK33Q9BYT3 514 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 DNAJC12Q9UKB3 198 aa16.03■□□□□ 0.16
GCOM1-212ENST00000496627 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 A6NNZ2 444 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 TCP10L2B9ZVM9 353 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 CCDC188H7C350 402 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 KRIT1O00522 736 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 MUTP22033 750 aa16.02■□□□□ 0.16
GCOM1-212ENST00000496627 CCT5P48643 541 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms