RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 IQUBQ8NA54 791 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CCDC12Q8WUD4 166 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 HAS1Q92839 578 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CUL5Q93034 780 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CCDC47Q96A33 483 aaKnown RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 MTMR8Q96EF0 704 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 PRIMPOLQ96LW4 560 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 SH3GL3Q99963 347 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 NACA2Q9H009 215 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 LMCD1Q9NZU5 365 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 TMX2Q9Y320 296 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 NFE2L3Q9Y4A8 694 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 FAM86B1E9PN63 330 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 FAM86B2P0C5J1 330 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CYP2C19P33261 490 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 SPP2Q13103 211 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 TNIP1Q15025 636 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CALCRLQ16602 461 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 HS1BP3Q53T59 392 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 PRR16Q569H4 304 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 RRAGBQ5VZM2 374 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 DYMQ7RTS9 669 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 TMEM110Q86TL2 294 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 FBXO11Q86XK2 927 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 SUGP1Q8IWZ8 645 aaKnown RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 DRAXINQ8NBI3 349 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 PLEKHG4BQ96PX9 1271 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CRACR2AQ9BSW2 395 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 NAT10Q9H0A0 1025 aaKnown RBP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 BCAS3Q9H6U6 928 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 RIC8AQ9NPQ8 531 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 GGA3Q9NZ52 723 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 LCMT1Q9UIC8 334 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 MYH6P13533 1939 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 LILRA1O75019 489 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SERPINC1P01008 464 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MYCLP1P12525 358 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF24P17028 368 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 STIP1P31948 543 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MRPL12P52815 198 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 PRPF4BQ13523 1007 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MORC3Q14149 939 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SLC5A9Q2M3M2 681 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ARL6IP4Q66PJ3 421 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 DEPDC4Q8N2C3 294 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 GLIS3Q8NEA6 775 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MTMR9Q96QG7 549 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 AMNQ9BXJ7 453 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 DDX25Q9UHL0 483 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SIPA1L1O43166 1804 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 LAMA3Q16787 3333 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 PYGLP06737 847 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 FCER1AP12319 257 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SMARCA1P28370 1054 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 FANCCQ00597 558 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MYL5Q02045 173 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 GALNT17Q6IS24 598 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 CABP7Q86V35 215 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 GMCL1P1Q8NEA9 526 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SPATA20Q8TB22 786 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ANKRD7Q92527 254 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MIEF2Q96C03 454 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ANO3Q9BYT9 981 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 UNC45AQ9H3U1 944 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 INTS13Q9NVM9 706 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 LRWD1Q9UFC0 647 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MORC2Q9Y6X9 1032 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MYH15Q9Y2K3 1946 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ESYT2A0FGR8 921 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 MEIS1O00470 390 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 NFIBO00712 420 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ZBTB39O15060 712 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 TPPPO94811 219 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 BMP15O95972 392 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 VCAM1P19320 739 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 TPP2P29144 1249 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 LONP1P36776 959 aaKnown RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 NT5C2P49902 561 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF280AP59817 542 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 CYP4A11Q02928 519 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 PDCD2Q16342 344 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-213ENST00000496622 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
SSBP1-213ENST00000496622 NT5DC1Q5TFE4 455 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms