RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ADCY8P40145 1251 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 IL13RA1P78552 427 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 BTBD8Q5XKL5 378 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 DPY19L2P1Q6NXN4 242 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 USP30Q70CQ3 517 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 FGD2Q7Z6J4 655 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 NINJ1Q92982 152 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 IPPKQ9H8X2 491 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 SLC52A2Q9HAB3 445 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 PLD2O14939 933 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 RFPL3O75679 317 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 DNAJC8O75937 253 aaPredicted RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 CLSTN1O94985 981 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 HMGCRP04035 888 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 VIL1P09327 827 aaKnown RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 GJA4P35212 333 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 GPR85P60893 370 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 SUMO1P63165 101 aaKnown RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 GRM7Q14831 915 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 TRIM61Q5EBN2 209 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 ZC3H12BQ5HYM0 836 aaKnown RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 BRAPQ7Z569 592 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 NIM1KQ8IY84 436 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 ULK2Q8IYT8 1036 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 SYNPOQ8N3V7 929 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 GSTCDQ8NEC7 633 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 MFSD3Q96ES6 412 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 SCLYQ96I15 445 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 AGO3Q9H9G7 860 aaKnown RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 SPC25Q9HBM1 224 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 REXO2Q9Y3B8 237 aaKnown RBP5.33□□□□□ -1.56
CLK1-214ENST00000496205 PRKAB1Q9Y478 270 aa5.33□□□□□ -1.56
CLK1-214ENST00000496205 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 GSG1L2A8MUP6 293 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 PTPN1P18031 435 aaKnown RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 EIF4HQ15056 248 aaKnown RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 PCOLCEQ15113 449 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 FNDC3BQ53EP0 1204 aaKnown RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 RNF187Q5TA31 235 aaPredicted RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 TRIM68Q6AZZ1 485 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 TMPRSS6Q8IU80 811 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 TMEM176AQ96HP8 235 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 TTPALQ9BTX7 342 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 MRPL4Q9BYD3 311 aaKnown RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 SLKQ9H2G2 1235 aaPredicted RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 AURKAIP1Q9NWT8 199 aaPredicted RBP5.32□□□□□ -1.56
CLK1-214ENST00000496205 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 PLAAQ9Y263 795 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
CLK1-214ENST00000496205 CCDC163A0A0D9SF12 145 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.31□□□□□ -1.56
CLK1-214ENST00000496205 FAM47E-STBD1D6RA91 191 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 KCNQ2O43526 872 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 RAMP2O60895 175 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 MYCLP1P12525 358 aaPredicted RBP5.31□□□□□ -1.56
CLK1-214ENST00000496205 SLC25A3Q00325 362 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 HGFACQ04756 655 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 ZNF460Q14592 562 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 RNF180Q86T96 592 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 ANKRD13AQ8IZ07 590 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 IFNL3Q8IZI9 196 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 D2HGDHQ8N465 521 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 UBR7Q8N806 425 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 VOPP1Q96AW1 172 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 ZFYVE21Q9BQ24 234 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 TARS2Q9BW92 718 aaKnown RBP5.31□□□□□ -1.56
CLK1-214ENST00000496205 RIC8BQ9NVN3 520 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 GALNT8Q9NY28 637 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 NDOR1Q9UHB4 597 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 SFMBT1Q9UHJ3 866 aa5.31□□□□□ -1.56
CLK1-214ENST00000496205 FOXN1O15353 648 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 RASGRP1O95267 797 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 PTGS1P23219 599 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 MC4RP32245 332 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 STAT3P40763 770 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 IL12RB1P42701 662 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 MRE11P49959 708 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 RRP1BQ14684 758 aaKnown RBP5.3□□□□□ -1.56
CLK1-214ENST00000496205 STILQ15468 1287 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 STYK1Q6J9G0 422 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 ADGRE4PQ86SQ3 457 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 OR14K1Q8NGZ2 314 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLK1-214ENST00000496205 STAG1Q8WVM7 1258 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 PRRX2Q99811 253 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 BRINP2Q9C0B6 783 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 WDR26Q9H7D7 661 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 INCENPQ9NQS7 918 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 PARPBPQ9NWS1 579 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 BTBD7Q9P203 1132 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 SRPK3Q9UPE1 567 aa5.3□□□□□ -1.56
CLK1-214ENST00000496205 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
CLK1-214ENST00000496205 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
CLK1-214ENST00000496205 PDE8AO60658 829 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms