RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 A0A1W2PPC1 479 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 ZBTB39O15060 712 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 SPTLC2O15270 562 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 GAS2O43903 313 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 YEATS4O95619 227 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 CHRNA1P02708 482 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 VTNP04004 478 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 TXLNAP40222 546 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 PTPAQ15257 358 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 CABP7Q86V35 215 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 TCP11Q8WWU5 503 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 MTRQ99707 1265 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
CSNK1E-213ENST00000495232 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 A0A087WWV3 80 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 ZBBXA8MT70 800 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 SLC26A4O43511 780 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 NBNO60934 754 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 DGAT1O75907 488 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 RARRES1P49788 294 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 EPHB4P54760 987 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 DNM1Q05193 864 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 MGAT3Q09327 533 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 EMC2Q15006 297 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 SHHQ15465 462 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 TMEM240Q5SV17 173 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 USP38Q8NB14 1042 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 SEPT8Q92599 483 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.258e-9■■□□□ 12.1
CSNK1E-213ENST00000495232 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 ATP6V0A4Q9HBG4 840 aa13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 MORC2Q9Y6X9 1032 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-213ENST00000495232 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 PPP6R2O75170 966 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 CXCL10P02778 98 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 GHRP10912 638 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 KRT85P78386 507 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 IKBKEQ14164 716 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 ECM1Q16610 540 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 KIZQ2M2Z5 673 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 ODR4Q5SWX8 454 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 C9orf50Q5SZB4 431 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 TRAF7Q6Q0C0 670 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 TSHZ1Q6ZSZ6 1077 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 RHPN2Q8IUC4 686 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 APBB2Q92870 758 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 FBXO2Q9UK22 296 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 SQORQ9Y6N5 450 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 ARID2Q68CP9 1835 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 LOXHD1Q8IVV2 1947 aa13.45□□□□□ -0.26
CSNK1E-213ENST00000495232 ASAP2O43150 1006 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 EFCAB14O75071 495 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 BAIAP3O94812 1187 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 EYA4O95677 639 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 KCNJ6P48051 423 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 ME1P48163 572 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 GRIN1Q05586 938 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 PAK2Q13177 524 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 DRP2Q13474 957 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 MBTPS1Q14703 1052 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 SPECC1Q5M775 1068 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 FBXO47Q5MNV8 452 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 HYIQ5T013 277 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms