RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 LXNQ9BS40 222 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 WDR11Q9BZH6 1224 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 COL2A1P02458 1487 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 GOLGA6BA6NDN3 693 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 AGPSO00116 658 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 TULP1O00294 542 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 KCNK3O14649 394 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 RPS6KA1Q15418 735 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 ZSCAN26Q16670 478 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 TRMT1LQ7Z2T5 733 aaKnown RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 RTKN2Q8IZC4 609 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 IFT81Q8WYA0 676 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FIZ1Q96SL8 496 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 KRT12Q99456 494 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 MXRA8Q9BRK3 442 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 STK32BQ9NY57 414 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 CCPG1Q9ULG6 757 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FRMD4BQ9Y2L6 1034 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 ZNF646O15015 1829 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FLOT1O75955 427 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 GLI1P08151 1106 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 TRIM49P0CI25 452 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 TRIM49CP0CI26 452 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 ITGB5P18084 799 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 PRKCIP41743 596 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 JAM2P57087 298 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 VPS36Q86VN1 386 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
CHMP3-209ENST00000494623 AGPAT3Q9NRZ7 376 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 ESYT3A0FGR9 886 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 HIP1RO75146 1068 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 STAT1P42224 750 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 FMO5P49326 533 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 GUCY2DQ02846 1103 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 NBPF9Q3BBW0 867 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 STXBP4Q6ZWJ1 553 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 ZNF341Q9BYN7 854 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 EPB41L5Q9HCM4 733 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 SAMM50Q9Y512 469 aa12.23□□□□□ -0.45
CHMP3-209ENST00000494623 FRMPD4Q14CM0 1322 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 ZSCAN5CA6NGD5 496 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 TMCO5BA8MYB1 307 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 DDX3XO00571 662 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 TBC1D12O60347 775 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 EXOC3O60645 756 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 RXRBP28702 533 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 ACTN2P35609 894 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 SETQ01105 290 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 GLE1Q53GS7 698 aaKnown RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 LEKR1Q6ZMV7 388 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 MIER3Q7Z3K6 550 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 KLHL7Q8IXQ5 586 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 IFT20Q8IY31 132 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 COL20A1Q9P218 1284 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 BTNL10A8MVZ5 291 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 NFIBO00712 420 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 CEP104O60308 925 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 PLA2G6O60733 806 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 FERP16591 822 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 ZNF131P52739 623 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 EPHB4P54760 987 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 DGKZQ13574 1117 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
CHMP3-209ENST00000494623 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 HOOK2Q96ED9 719 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 HOMER2Q9NSB8 354 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 ODF2LQ9ULJ1 636 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 NFU1Q9UMS0 254 aa12.22□□□□□ -0.45
CHMP3-209ENST00000494623 EVI5O60447 810 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 KIF4AO95239 1232 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 PTGER2P43116 358 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 DRAP1Q14919 205 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-209ENST00000494623 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 TSEN2Q8NCE0 465 aaKnown RBP12.21□□□□□ -0.45
CHMP3-209ENST00000494623 IL31RAQ8NI17 732 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 GOLGA5Q8TBA6 731 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 RUBCNQ92622 972 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 INPP4AQ96PE3 977 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-209ENST00000494623 TRERF1Q96PN7 1200 aa12.21□□□□□ -0.45
CHMP3-209ENST00000494623 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms