RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 INSL6Q9Y581 213 aa24.57■■□□□ 1.52
HPS3-207ENST00000494327 RFXAPO00287 272 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 RPS6KA5O75582 802 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 CRYBB1P53674 252 aaPredicted RBP24.56■■□□□ 1.52
HPS3-207ENST00000494327 NLRP11P59045 1033 aaKnown RBP24.56■■□□□ 1.52
HPS3-207ENST00000494327 SPRED2Q7Z698 418 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 LINC01465Q8N7H1 131 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 TMEM40Q8WWA1 233 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 MTMR9Q96QG7 549 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 YME1L1Q96TA2 773 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 LXNQ9BS40 222 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 SIP14410 1827 aa24.56■■□□□ 1.52
HPS3-207ENST00000494327 PTPRSQ13332 1948 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 GPR32O75388 356 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 TTC38Q5R3I4 469 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 MCTP1Q6DN14 999 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 TPH2Q8IWU9 490 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 SCLT1Q96NL6 688 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 EIF2AK1Q9BQI3 630 aaKnown RBP24.55■■□□□ 1.52
HPS3-207ENST00000494327 NOL7Q9UMY1 257 aaKnown RBP24.55■■□□□ 1.52
HPS3-207ENST00000494327 SMC3Q9UQE7 1217 aa24.55■■□□□ 1.52
HPS3-207ENST00000494327 IBSPP21815 317 aaPredicted RBP24.54■■□□□ 1.52
HPS3-207ENST00000494327 NPEPPSP55786 919 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 DRP2Q13474 957 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 ADGRE1Q14246 886 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 RTN4RL1Q86UN2 441 aaPredicted RBP24.54■■□□□ 1.52
HPS3-207ENST00000494327 LINC01599Q8WXQ3 324 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 CEP170P1Q96L14 293 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 FTHL17Q9BXU8 183 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 ZSWIM4Q9H7M6 989 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 CYP26B1Q9NR63 512 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 MTUS1Q9ULD2 1270 aa24.54■■□□□ 1.52
HPS3-207ENST00000494327 MICAL3Q7RTP6 2002 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 LINC01553A4QN01 128 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 U2AF2P26368 475 aaKnown RBP eCLIP24.53■■□□□ 1.52
HPS3-207ENST00000494327 DNM2P50570 870 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 HTRA4P83105 476 aaPredicted RBP24.53■■□□□ 1.52
HPS3-207ENST00000494327 NBR1Q14596 966 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 C4orf19Q8IY42 314 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 ZNF579Q8NAF0 562 aaKnown RBP24.53■■□□□ 1.52
HPS3-207ENST00000494327 PPM1EQ8WY54 764 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 CEP89Q96ST8 783 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 TMX1Q9H3N1 280 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 ERVK-5Q9HDB9 667 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 ST3GAL5Q9UNP4 418 aa24.53■■□□□ 1.52
HPS3-207ENST00000494327 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.53■■□□□ 1.52
HPS3-207ENST00000494327 EPOPA6NHQ4 379 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 H3BQV1 296 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 ZBTB39O15060 712 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 GPR182O15218 404 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 MAFO75444 373 aaPredicted RBP24.52■■□□□ 1.52
HPS3-207ENST00000494327 SLITRK3O94933 977 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 YWHABP31946 246 aaKnown RBP24.52■■□□□ 1.52
HPS3-207ENST00000494327 TECP42680 631 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 ODR4Q5SWX8 454 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 OTUD6AQ7L8S5 288 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 NLRP7Q8WX94 980 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 ADAMTS10Q9H324 1103 aa24.52■■□□□ 1.52
HPS3-207ENST00000494327 BMP2KQ9NSY1 1161 aaPredicted RBP24.52■■□□□ 1.52
HPS3-207ENST00000494327 WDR81Q562E7 1941 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 EVPLQ92817 2033 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 POTEMA6NI47 508 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 OR52Z1P0C646 297 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 TRAPPC10P48553 1259 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 GPC3P51654 580 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 XKR9Q5GH70 373 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 FAM228AQ86W67 206 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 SLC17A8Q8NDX2 589 aa24.51■■□□□ 1.51
HPS3-207ENST00000494327 TGS1Q96RS0 853 aaKnown RBP24.51■■□□□ 1.51
HPS3-207ENST00000494327 SUCLA2Q9P2R7 463 aaPredicted RBP24.51■■□□□ 1.51
HPS3-207ENST00000494327 IGKV6-21A0A0C4DH24 114 aa24.5■■□□□ 1.51
HPS3-207ENST00000494327 DENND3A2RUS2 1198 aa24.5■■□□□ 1.51
HPS3-207ENST00000494327 POLGP54098 1239 aaPredicted RBP24.5■■□□□ 1.51
HPS3-207ENST00000494327 ORC2Q13416 577 aaPredicted RBP24.5■■□□□ 1.51
HPS3-207ENST00000494327 SLC7A3Q8WY07 619 aa24.5■■□□□ 1.51
HPS3-207ENST00000494327 HSD17B14Q9BPX1 270 aa24.5■■□□□ 1.51
HPS3-207ENST00000494327 JPH2Q9BR39 696 aaPredicted RBP24.5■■□□□ 1.51
HPS3-207ENST00000494327 TSPYL2Q9H2G4 693 aaPredicted RBP24.5■■□□□ 1.51
HPS3-207ENST00000494327 MGEA5O60502 916 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 EIF4BP23588 611 aaKnown RBP24.49■■□□□ 1.51
HPS3-207ENST00000494327 CCDC85BQ15834 202 aaPredicted RBP24.49■■□□□ 1.51
HPS3-207ENST00000494327 RHPN2Q8IUC4 686 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 ZNF710Q8N1W2 664 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 MICALL1Q8N3F8 863 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 NEK9Q8TD19 979 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 SP7Q8TDD2 431 aaPredicted RBP24.49■■□□□ 1.51
HPS3-207ENST00000494327 ADAM2Q99965 735 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
HPS3-207ENST00000494327 A0A087WWV3 80 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 CSDE1O75534 798 aaKnown RBP24.48■■□□□ 1.51
HPS3-207ENST00000494327 FGFR4P22455 802 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 TOB1P50616 345 aaPredicted RBP24.48■■□□□ 1.51
HPS3-207ENST00000494327 ERVK-21P61565 698 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 LARP1BQ659C4 914 aaKnown RBP24.48■■□□□ 1.51
HPS3-207ENST00000494327 LRFN2Q9ULH4 789 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 PCDHB6Q9Y5E3 794 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 CHD9Q3L8U1 2897 aa24.48■■□□□ 1.51
HPS3-207ENST00000494327 A0A087WZ62 844 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 STAG3L1P0CL83 205 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 DARSP14868 501 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms