RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 PCDHA6Q9UN73 950 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 PCDHA8Q9Y5H6 950 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ADAMTSL1Q8N6G6 1762 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 FER1L6Q2WGJ9 1857 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 SMTNL1A8MU46 457 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-213ENST00000494016 ADAM11O75078 769 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 BMP15O95972 392 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 PARP1P09874 1014 aaKnown RBP6.8□□□□□ -1.32
CPSF7-213ENST00000494016 AKR1B1P15121 316 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 CALML3P27482 149 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 SHMT1P34896 483 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 CRKP46108 304 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 FCGRTP55899 365 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 TGFB2P61812 414 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
CPSF7-213ENST00000494016 LRMPQ12912 555 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 PICALMQ13492 652 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 MORC3Q14149 939 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 POSTNQ15063 836 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 DACT2Q5SW24 774 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 GALNT17Q6IS24 598 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 RASGRP2Q7LDG7 609 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 DRC7Q8IY82 874 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 GRAMD1CQ8IYS0 662 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 ZDHHC15Q96MV8 337 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 MED15Q96RN5 788 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 SPZ1Q9BXG8 430 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 OSBPL5Q9H0X9 879 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-213ENST00000494016 RIOX1Q9H6W3 641 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 DBNDD1Q9H9R9 158 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 ZFYVE1Q9HBF4 777 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 BARHL2Q9NY43 387 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 MTMR4Q9NYA4 1195 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 CLIP2Q9UDT6 1046 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 STX8Q9UNK0 236 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 PCDHAC2Q9Y5I4 1007 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 SCN9AQ15858 1988 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 PLIN4Q96Q06 1357 aa6.8□□□□□ -1.32
CPSF7-213ENST00000494016 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 EDIL3O43854 480 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 B3GALT4O96024 378 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 SLFN14P0C7P3 912 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 SNHG28P0DPA3 235 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 ATP1A3P13637 1013 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 GNA15P30679 374 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 GATA4P43694 442 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 TERF1P54274 439 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 FANCCQ00597 558 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 FSTL1Q12841 308 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 NFIAQ12857 509 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 ZRSR1Q15695 479 aaKnown RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 DTHD1Q6ZMT9 781 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 ARHGAP27Q6ZUM4 889 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 SIAH1Q8IUQ4 282 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 LRRC8AQ8IWT6 810 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 PDILTQ8N807 584 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 C3orf58Q8NDZ4 430 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 TEKT1Q969V4 418 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 PIGSQ96S52 555 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 DUSP9Q99956 384 aaKnown RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 UBA5Q9GZZ9 404 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 ZMYND12Q9H0C1 365 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 IFNKQ9P0W0 207 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 SWAP70Q9UH65 585 aa6.79□□□□□ -1.32
CPSF7-213ENST00000494016 GREB1LQ9C091 1923 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-213ENST00000494016 MYO3BQ8WXR4 1341 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 SIPA1L1O43166 1804 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 MYH8P13535 1937 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 DICER1Q9UPY3 1922 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 VWA3AA6NCI4 1184 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 SMCO2A6NFE2 343 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 DDTLA6NHG4 134 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 ECE2O60344 883 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 WISP1O95388 367 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 PDHBP11177 359 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 CASP1P29466 404 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 GSTT1P30711 240 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 MCM7P33993 719 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 FAAP100Q0VG06 881 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 ARL6IP4Q66PJ3 421 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 TRIML1Q8N9V2 468 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 MLKLQ8NB16 471 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 ENOX1Q8TC92 643 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 WFDC12Q8WWY7 111 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 DPF2Q92785 391 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 SMARCE1Q969G3 411 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 MKL1Q969V6 931 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms